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Merge branch 'main' into FDM-relation
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.github/workflows/paper.yml

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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v4
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- uses: actions/setup-python@v4
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- name: Install Python requirements
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run: pip install -r requirements.txt
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- name: Create contributor snippet
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run: python contributors.py
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- uses: xu-cheng/latex-action@v3
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with:

contributors.py

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#!/usr/bin/env python3
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import jinja2
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import os
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import yaml
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with open("contributors.yml") as f:
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data = yaml.safe_load(f)
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# Ensure that we have unique indices for the affiliations
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affiliations = list()
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for authors in data["authors"]:
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affiliations.extend(authors.get("affiliations", []))
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data["affiliations"] = {aff: i + 1 for i, aff in enumerate(set(affiliations))}
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for author in data["authors"]:
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author["affiliations"] = [data["affiliations"][aff] for aff in author.get("affiliations", [])]
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env = jinja2.Environment(
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loader=jinja2.FileSystemLoader(os.getcwd()),
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keep_trailing_newline=True,
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)
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with open("./contributors.tex", "w") as out:
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out.write(env.get_template("contributors.tex.j2").render(data=data))

contributors.tex

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% The file contributors.tex is automatically generated by running contributors.py.
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% Changed within will be OVERWRITTEN.
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% For changes to the tex template, change contributors.tex.j2.
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% For changes to the author information, change contributors.yml.
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%
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\author[]{Markus Ankenbrand}
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\author[]{Bernd Flemisch}
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\author[5]{Florian Goth}
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\author[3]{Jean-Noël Grad}
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\author[2]{Dominic Kempf}
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\author[4]{Jan Linxweiler}
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\author[]{Axel Loewe}
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\author[1]{Frank Löffler}
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\author[1]{Philipp Matthias Schäfer}
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\author[]{Alexander Struck}
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\affil[1]{Competence Center Digital Research, Michael Stifel Center Jena, Friedrich Schiller University Jena, Jena, Germany}
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\affil[2]{Heidelberg University, Scientific Software Center, Germany}
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\affil[3]{Institute for Computational Physics, University of Stuttgart, Germany}
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\affil[4]{Technische Universität Braunschweig, Germany}
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\affil[5]{Institute for Theoretical Physics and Astrophysics, University of Würzburg, Germany}

contributors.tex.j2

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% The file contributors.tex is automatically generated by running contributors.py.
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% Changed within will be OVERWRITTEN.
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% For changes to the tex template, change contributors.tex.j2.
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% For changes to the author information, change contributors.yml.
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%
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{%- for author in data.authors %}
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\author[{{ author.affiliations|join(", ") }}]{{ "{" }}{{ author.author }}{{ "}" }}
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{%- endfor %}
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{%- for affiliation, index in data.affiliations.items() %}
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\affil[{{ index }}]{{ "{" }}{{ affiliation }}{{ "}" }}
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{%- endfor %}

contributors.yml

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authors:
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- author: "Markus Ankenbrand"
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- author: "Bernd Flemisch"
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- author: "Florian Goth"
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firstName: Florian
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lastName: Goth
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initials: FG
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affiliations:
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- Institute for Theoretical Physics and Astrophysics, University of Würzburg, Germany
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orcid: 0000-0003-2707-4790
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acknowledgements: |
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FG acknowledges funding from the Deutsche Forschungsgemeinschaft
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(DFG, German Research Foundation) through the SFB 1170 “Tocotronics”,
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project Z03 - project number \geprislink{258499086}.
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- author: "Jean-Noël Grad"
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firstName: Jean-Noël
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lastName: Grad
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initials: JNG
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affiliations:
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- Institute for Computational Physics, University of Stuttgart, Germany
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orcid: 0000-0002-5821-4912
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acknowledgements: |
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JNG acknowledges funding from the Deutsche Forschungsgemeinschaft
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(DFG, German Research Foundation) - project number \geprislink{391126171}
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(PI: Holm) and from the European Union – this work has received funding
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from the European High Performance Computing Joint Undertaking (JU) and
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countries participating in the project under grant agreement
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No [101093169](https://doi.org/10.3030/101093169).
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- author: "Dominic Kempf"
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firstName: Dominic
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lastName: Kempf
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initials: DK
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affiliations:
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- Heidelberg University, Scientific Software Center, Germany
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orcid: 0000-0002-6140-2332
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acknowledgements: |
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DK acknowledges support from the Scientific Software Center which is funded as part
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of the Excellence Strategy of the German Federal and State Governments.
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- author: "Jan Linxweiler"
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firstName: Jan
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lastName: Linxweiler
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initials: JL
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affiliations:
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- Technische Universität Braunschweig, Germany
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orcid: 0000-0002-2755-5087
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- author: "Axel Loewe"
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- author: "Frank Löffler"
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firstName: Frank
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lastName: Löffler
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initials: FL
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affiliations:
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- Competence Center Digital Research, Michael Stifel Center Jena, Friedrich Schiller University Jena, Jena, Germany
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orcid: 0000-0001-6643-6323
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- author: "Philipp Matthias Schäfer"
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firstName: Philipp Matthias
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lastName: Schäfer
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initials: PMS
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affiliations:
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- Competence Center Digital Research, Michael Stifel Center Jena, Friedrich Schiller University Jena, Jena, Germany
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orcid: 0000-0003-3931-6670
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- author: "Alexander Struck"

paper.tex

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\documentclass[a4paper]{article}
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\usepackage{authblk}
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\usepackage[]{biblatex}
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\usepackage{graphicx}
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\usepackage{hyperref}
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\addbibresource{bibliography.bib}
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\addbibresource{positionpaper.bib}
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\title{Establishing RSE departments in German research institutions}
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\author{
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Bernd Flemisch
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\and
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Florian Goth
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\and
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Dominic Kempf
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\and
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Jan Linxweiler
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\and
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Frank Löffler
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\and
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Philipp Schäfer
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\and
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Alexander Struck
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\and
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Axel Loewe
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\and
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Markus Ankenbrand
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\and
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Jean-Noël Grad
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}
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\include{contributors.tex}
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\date{\today}
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Topics of RSE and RDM do have noticeable similarities.
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While software management often requires different solutions than that of data, collaboration between an RSE department and an FDM department will in practice be really close.
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In contrast to most other organisations mentioned within this section,
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the requirements on their respective members and members of an RSE group are so similar that organisations might consider focus on one merged RSE \& FDM department.
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the requirements on their respective members and members of an RSE group are so similar that organisations might consider focus on one merged RSE \& RDM department.
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\subsection{RSE Infrastructure Provisioning}
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\label{sec:infrastructure}
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An already established RSE concept at an institution increases the chances of being successful in such calls.
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\end{enumerate}
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In addition to these funding options, we encourage funding agencies to provide seed funding for the establishment of RSE structures.
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Such seed grants ease the local decision making process and give RSEs the leeway to establish collaborations with researchers without the direct need to ask for remuneration.
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% We see two possibilities to acquire additional funds.
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% Some can come from the convergence of existing central structures.
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% Other funds must come from the departments.

requirements.txt

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jinja2
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pyaml

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