Merge branch 'main' into fix-remove_deprecated

Author: holke

.github/workflows/tests_cmake_t8code_api.yml

@@ -85,15 +85,15 @@ jobs:
       run: export LESS_TEST_OPTION="-DT8CODE_ENABLE_LESS_TESTS=ON"
            && echo LESS_TEST_OPTION="$LESS_TEST_OPTION" >> $GITHUB_ENV
     - name: build config variables
-      run: export CONFIG_OPTIONS="${LESS_TEST_OPTION} -GNinja -DCMAKE_C_FLAGS_DEBUG=${DEBUG_CONFIG} -DCMAKE_CXX_FLAGS_DEBUG=${DEBUG_CONFIG} -DT8CODE_USE_SYSTEM_SC=ON -DT8CODE_USE_SYSTEM_P4EST=ON -DT8CODE_BUILD_PEDANTIC=ON -DT8CODE_BUILD_WALL=ON -DT8CODE_BUILD_WERROR=ON -DT8CODE_ENABLE_MPI=$MPI -DCMAKE_BUILD_TYPE=$BUILD_TYPE -DSC_DIR=$SC_PATH/install/cmake -DP4EST_DIR=$P4EST_PATH/install/cmake"
+      run: export CONFIG_OPTIONS="${LESS_TEST_OPTION} -GNinja -DCMAKE_C_FLAGS_DEBUG=${DEBUG_CONFIG} -DCMAKE_CXX_FLAGS_DEBUG=${DEBUG_CONFIG} -DT8CODE_BUILD_FORTRAN_INTERFACE=ON -DT8CODE_USE_SYSTEM_SC=ON -DT8CODE_USE_SYSTEM_P4EST=ON -DT8CODE_BUILD_PEDANTIC=ON -DT8CODE_BUILD_WALL=ON -DT8CODE_BUILD_WERROR=ON -DT8CODE_ENABLE_MPI=$MPI -DCMAKE_BUILD_TYPE=$BUILD_TYPE -DSC_DIR=$SC_PATH/install/cmake -DP4EST_DIR=$P4EST_PATH/install/cmake"
            && echo CONFIG_OPTIONS="$CONFIG_OPTIONS" >> $GITHUB_ENV
     # cmake and test with fortran
     - name: check fortran
       run: echo "Checking fortran"
     - name: echo cmake line
-      run: echo cmake ../ $CONFIG_OPTIONS -DT8CODE_BUILD_FORTRAN_INTERFACE=ON
+      run: echo cmake ../ $CONFIG_OPTIONS 
     - name: cmake MPI fortran debug
-      run: mkdir build_fortran && cd build_fortran && cmake ../ $CONFIG_OPTIONS -DT8CODE_ENABLE_FORTRAN=ON
+      run: mkdir build_fortran && cd build_fortran && cmake ../ $CONFIG_OPTIONS
     - name: OnFailUploadLog
       if: failure()
       uses: actions/upload-artifact@v4

api/t8_fortran_interface/t8_fortran_interface.c

@@ -139,11 +139,11 @@ t8_fortran_adapt_by_coordinates_callback (t8_forest_t forest, t8_forest_t forest
   /* Coarsen if a family was given and return value is negative. */
   if (is_family) {
     /* The elements form a family */
-    T8_ASSERT (t8_elements_are_family (scheme, elements));
+    T8_ASSERT (t8_elements_are_family (scheme, tree_class, elements));
     /* Build the parent. */
     t8_element_t *parent;
-    t8_element_new (scheme, 1, &parent);
-    t8_element_parent (scheme, elements[0], parent);
+    t8_element_new (scheme, tree_class, 1, &parent);
+    t8_element_get_parent (scheme, tree_class, elements[0], parent);
     /* Get the coordinates of the parent. */
     t8_forest_element_centroid (forest_from, which_tree, parent, midpoint);
 

example/advect/t8_advection.cxx

@@ -821,7 +821,7 @@ t8_advect_problem_partition (t8_advect_problem_t *problem, int measure_time)
     sc_stats_accumulate (&problem->stats[ADVECT_AMR], partition_time);
     problem->stats[ADVECT_PARTITION_DATA].count = 1;
     problem->stats[ADVECT_AMR].count = 1;
-    t8_debugf ("statis ghost: %f\n\n", ghost_time);
+    t8_debugf ("status ghost: %f\n\n", ghost_time);
   }
 
   /* destroy the old forest and the element data */

test/t8_cmesh_generator/t8_gtest_cmesh_cartestian_product.hxx

@@ -127,7 +127,7 @@ vector_to_iter_pair (const std::vector<Args>& vec)
 }
 
 /**
- * A helper function to recursively create the next tuple of parameters in a cartesion product way
+ * A helper function to recursively create the next tuple of parameters in a cartesian product way
  * 
  * @tparam Args 
  * @tparam B 
@@ -148,7 +148,7 @@ increment (const B& begins, std::pair<Args, Args>& r)
 }
 
 /**
- * A helper function to recursively create the next tuple of parameters in a cartesion product way
+ * A helper function to recursively create the next tuple of parameters in a cartesian product way
  * 
  * @tparam T 
  * @tparam TT 

test/t8_forest/t8_gtest_partition_data.cxx

@@ -130,7 +130,7 @@ gTestCompareEQ (const T& value1, const T& value2) -> std::enable_if_t<std::is_sa
  * \brief This function generates example data of the type \tparam T corresponding to the global 
  * element id of each element. It constructs one value per element. The data is defined according 
  * to the partition of \a initial_forest. Afterwards a call to \see t8_forest_partition_data() is made
- * which redistributes the example data array accordindly to the partition of \a partitioned_forest.
+ * which redistributes the example data array accordingly to the partition of \a partitioned_forest.
  * Once the partitioning of the example data array is finished, we check whether each process obtained
  * the correct data entries in the proper ordering.
  * 

test/t8_gtest_vec.cxx

@@ -26,7 +26,7 @@
 #include <t8_vec.h>
 #include <test/t8_gtest_custom_assertion.hxx>
 
-/* Wrapper for 3D vector dataype */
+/* Wrapper for 3D vector datatype */
 typedef double t8_test_vec[3];
 /* Accuracy used for comparisons with correct result */
 #define epsilon 1e-9