Worrying stan warning message during autodiff of integration #130

hyunjimoon · 2022-12-17T13:31:54Z

hyunjimoon
Dec 17, 2022
Maintainer

From S10N40Q2P3H0R1 errorlog (10 synthetic data, 40 (0-5 with .125 time_saveper), two stocks (ss, s) + process (sd = .1) and measurement noise added, 3 estimated params (frac1~frac3) two exceptions are repeated. Abscence of message fromdraws2data implies problem comes from autodiff and integration's interaction.

Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)

Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)

and line55 of stanfile is where auto-diff of integration happens

vector[5] integrated_result[N] = ode_rk45(vensim_ode_func, initial_outcome, initial_time, integration_times, adj_mat_push_frac1, time_saveper, process_noise_scale, adj_mat_push_frac2, adj_mat_pull_frac3);

23:01:59 - cmdstanpy - INFO - CmdStan start processing
chain 1 |██████████| 00:00 Sampling completed
                                                                                
23:01:59 - cmdstanpy - INFO - CmdStan done processing.
23:02:00 - cmdstanpy - INFO - compiling stan file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan to exe file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
23:02:15 - cmdstanpy - INFO - compiled model executable: /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
23:02:15 - cmdstanpy - WARNING - Stan compiler has produced 1 warnings:
23:02:15 - cmdstanpy - WARNING - 
--- Translating Stan model to C++ code ---
bin/stanc --include-paths=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1 --o=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan
Warning in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4: Declaration
    of arrays by placing brackets after a variable name is deprecated and
    will be removed in Stan 2.32.0. Instead use the array keyword before the
    type. This can be changed automatically using the auto-format flag to
    stanc

--- Compiling, linking C++ code ---
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c -include-pch stan/src/stan/model/model_header_threads.hpp.gch -x c++ -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS                -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"      /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o src/cmdstan/main_threads.o        -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"   stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_nvecserial.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_cvodes.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_idas.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_kinsol.a  stan/lib/stan_math/lib/tbb/libtbb.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc_proxy.dylib -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
rm -f /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o

23:02:15 - cmdstanpy - INFO - CmdStan start processing
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23:06:15 - cmdstanpy - INFO - CmdStan done processing.
23:06:15 - cmdstanpy - WARNING - Non-fatal error during sampling:
Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
Consider re-running with show_console=True if the above output is unclear!
                                                                                                                                                                                                                                                                                                                                
23:06:16 - cmdstanpy - INFO - compiling stan file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan to exe file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
23:06:32 - cmdstanpy - INFO - compiled model executable: /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
23:06:32 - cmdstanpy - WARNING - Stan compiler has produced 1 warnings:
23:06:32 - cmdstanpy - WARNING - 
--- Translating Stan model to C++ code ---
bin/stanc --include-paths=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1 --o=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan
Warning in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4: Declaration
    of arrays by placing brackets after a variable name is deprecated and
    will be removed in Stan 2.32.0. Instead use the array keyword before the
    type. This can be changed automatically using the auto-format flag to
    stanc

--- Compiling, linking C++ code ---
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c -include-pch stan/src/stan/model/model_header_threads.hpp.gch -x c++ -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS                -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"      /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o src/cmdstan/main_threads.o        -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"   stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_nvecserial.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_cvodes.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_idas.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_kinsol.a  stan/lib/stan_math/lib/tbb/libtbb.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc_proxy.dylib -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
rm -f /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o

23:06:32 - cmdstanpy - INFO - CmdStan start processing
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chain 1 |██████████| 3:59:27 Sampling completed                     
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chain 4 |██████████| 3:59:27 Sampling completed                     
03:06:00 - cmdstanpy - INFO - CmdStan done processing.
03:06:00 - cmdstanpy - WARNING - Non-fatal error during sampling:
Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 70, column 4 to column 39)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
Consider re-running with show_console=True if the above output is unclear!
                                                                                                                                                                                                                                                                                                                                
03:06:00 - cmdstanpy - WARNING - Some chains may have failed to converge.
	Chain 3 had 250 iterations at max treedepth (100.0%)
	Use function "diagnose()" to see further information.
03:06:01 - cmdstanpy - INFO - compiling stan file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan to exe file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
03:06:10 - cmdstanpy - INFO - compiled model executable: /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
03:06:10 - cmdstanpy - WARNING - Stan compiler has produced 1 warnings:
03:06:10 - cmdstanpy - WARNING - 
--- Translating Stan model to C++ code ---
bin/stanc --include-paths=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1 --o=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan
Warning in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4: Declaration
    of arrays by placing brackets after a variable name is deprecated and
    will be removed in Stan 2.32.0. Instead use the array keyword before the
    type. This can be changed automatically using the auto-format flag to
    stanc

--- Compiling, linking C++ code ---
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c -include-pch stan/src/stan/model/model_header_threads.hpp.gch -x c++ -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS                -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"      /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o src/cmdstan/main_threads.o        -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"   stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_nvecserial.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_cvodes.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_idas.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_kinsol.a  stan/lib/stan_math/lib/tbb/libtbb.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc_proxy.dylib -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
rm -f /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o

03:06:10 - cmdstanpy - INFO - CmdStan start processing
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chain 1 |▋         | 01:41 Status
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chain 1 |██████████| 02:58 Sampling completed                       
                                                                                                                                                                                                                                                                                                                                
chain 2 |██████████| 02:58 Sampling completed                       
chain 3 |██████████| 02:58 Sampling completed                       
chain 4 |██████████| 02:58 Sampling completed                       
03:09:09 - cmdstanpy - INFO - CmdStan done processing.
03:09:09 - cmdstanpy - WARNING - Non-fatal error during sampling:
Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 70, column 4 to column 39)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
Consider re-running with show_console=True if the above output is unclear!
03:09:10 - cmdstanpy - INFO - compiling stan file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan to exe file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
03:09:18 - cmdstanpy - INFO - compiled model executable: /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
03:09:18 - cmdstanpy - WARNING - Stan compiler has produced 1 warnings:
03:09:18 - cmdstanpy - WARNING - 
--- Translating Stan model to C++ code ---
bin/stanc --include-paths=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1 --o=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan
Warning in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4: Declaration
    of arrays by placing brackets after a variable name is deprecated and
    will be removed in Stan 2.32.0. Instead use the array keyword before the
    type. This can be changed automatically using the auto-format flag to
    stanc

--- Compiling, linking C++ code ---
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c -include-pch stan/src/stan/model/model_header_threads.hpp.gch -x c++ -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS                -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"      /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o src/cmdstan/main_threads.o        -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"   stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_nvecserial.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_cvodes.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_idas.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_kinsol.a  stan/lib/stan_math/lib/tbb/libtbb.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc_proxy.dylib -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
rm -f /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o

03:09:19 - cmdstanpy - INFO - CmdStan start processing
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chain 1 |██████████| 09:05 Sampling completed                       
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03:18:24 - cmdstanpy - INFO - CmdStan done processing.
03:18:24 - cmdstanpy - WARNING - Non-fatal error during sampling:
Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 70, column 4 to column 39)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 70, column 4 to column 39)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
Consider re-running with show_console=True if the above output is unclear!
                                                                                                                                                                                                                                                                                                                                
03:18:25 - cmdstanpy - INFO - compiling stan file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan to exe file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
03:18:35 - cmdstanpy - INFO - compiled model executable: /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
03:18:35 - cmdstanpy - WARNING - Stan compiler has produced 1 warnings:
03:18:35 - cmdstanpy - WARNING - 
--- Translating Stan model to C++ code ---
bin/stanc --include-paths=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1 --o=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan
Warning in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4: Declaration
    of arrays by placing brackets after a variable name is deprecated and
    will be removed in Stan 2.32.0. Instead use the array keyword before the
    type. This can be changed automatically using the auto-format flag to
    stanc

--- Compiling, linking C++ code ---
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c -include-pch stan/src/stan/model/model_header_threads.hpp.gch -x c++ -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS                -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"      /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o src/cmdstan/main_threads.o        -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"   stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_nvecserial.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_cvodes.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_idas.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_kinsol.a  stan/lib/stan_math/lib/tbb/libtbb.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc_proxy.dylib -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
rm -f /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o

03:18:35 - cmdstanpy - INFO - CmdStan start processing
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03:27:38 - cmdstanpy - INFO - CmdStan done processing.
03:27:38 - cmdstanpy - WARNING - Non-fatal error during sampling:
Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: normal_lpdf: Scale parameter is 0, but must be positive! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 70, column 4 to column 39)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
Consider re-running with show_console=True if the above output is unclear!
03:27:39 - cmdstanpy - INFO - compiling stan file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan to exe file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
03:27:48 - cmdstanpy - INFO - compiled model executable: /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
03:27:48 - cmdstanpy - WARNING - Stan compiler has produced 1 warnings:
03:27:48 - cmdstanpy - WARNING - 
--- Translating Stan model to C++ code ---
bin/stanc --include-paths=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1 --o=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan
Warning in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4: Declaration
    of arrays by placing brackets after a variable name is deprecated and
    will be removed in Stan 2.32.0. Instead use the array keyword before the
    type. This can be changed automatically using the auto-format flag to
    stanc

--- Compiling, linking C++ code ---
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c -include-pch stan/src/stan/model/model_header_threads.hpp.gch -x c++ -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS                -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"      /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o src/cmdstan/main_threads.o        -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"   stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_nvecserial.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_cvodes.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_idas.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_kinsol.a  stan/lib/stan_math/lib/tbb/libtbb.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc_proxy.dylib -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
rm -f /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o

03:27:48 - cmdstanpy - INFO - CmdStan start processing
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chain 1 |██████████| 04:04 Sampling completed                       
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03:31:53 - cmdstanpy - INFO - CmdStan done processing.
03:31:53 - cmdstanpy - WARNING - Non-fatal error during sampling:
Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 71, column 4 to column 37)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 70, column 4 to column 39)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 70, column 4 to column 39)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.135) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
Consider re-running with show_console=True if the above output is unclear!
                                                                                                                                                                                                                                                                                                                                
03:31:54 - cmdstanpy - INFO - compiling stan file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan to exe file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
03:32:02 - cmdstanpy - INFO - compiled model executable: /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
03:32:02 - cmdstanpy - WARNING - Stan compiler has produced 1 warnings:
03:32:02 - cmdstanpy - WARNING - 
--- Translating Stan model to C++ code ---
bin/stanc --include-paths=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1 --o=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan
Warning in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4: Declaration
    of arrays by placing brackets after a variable name is deprecated and
    will be removed in Stan 2.32.0. Instead use the array keyword before the
    type. This can be changed automatically using the auto-format flag to
    stanc

--- Compiling, linking C++ code ---
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c -include-pch stan/src/stan/model/model_header_threads.hpp.gch -x c++ -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS                -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"      /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o src/cmdstan/main_threads.o        -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"   stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_nvecserial.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_cvodes.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_idas.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_kinsol.a  stan/lib/stan_math/lib/tbb/libtbb.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc_proxy.dylib -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
rm -f /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o

03:32:03 - cmdstanpy - INFO - CmdStan start processing
chain 1 |          | 00:00 Status
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chain 1 |██████████| 3:46:46 Sampling completed                     
                                                                                                                                                                                                                                                                                                                                
chain 2 |██████████| 3:46:46 Sampling completed                     
chain 3 |██████████| 3:46:46 Sampling completed                       
chain 4 |██████████| 3:46:46 Sampling completed                     
07:18:50 - cmdstanpy - INFO - CmdStan done processing.
07:18:50 - cmdstanpy - WARNING - Non-fatal error during sampling:
Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: normal_lpdf: Location parameter[1] is nan, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 70, column 4 to column 39)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (3.635) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45:  Failed to integrate to next output time (0.01) in less than max_num_steps steps (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
	Exception: ode_rk45: ode parameters and data is inf, but must be finite! (in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4 to column 208)
Consider re-running with show_console=True if the above output is unclear!
07:18:50 - cmdstanpy - WARNING - Some chains may have failed to converge.
	Chain 3 had 250 iterations at max treedepth (100.0%)
	Use function "diagnose()" to see further information.
07:18:51 - cmdstanpy - INFO - compiling stan file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan to exe file /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
07:19:00 - cmdstanpy - INFO - compiled model executable: /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
07:19:00 - cmdstanpy - WARNING - Stan compiler has produced 1 warnings:
07:19:00 - cmdstanpy - WARNING - 
--- Translating Stan model to C++ code ---
bin/stanc --include-paths=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1 --o=/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan
Warning in '/Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.stan', line 55, column 4: Declaration
    of arrays by placing brackets after a variable name is deprecated and
    will be removed in Stan 2.32.0. Instead use the array keyword before the
    type. This can be changed automatically using the auto-format flag to
    stanc

--- Compiling, linking C++ code ---
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c -include-pch stan/src/stan/model/model_header_threads.hpp.gch -x c++ -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.hpp
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes     -DSTAN_THREADS -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS                -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"      /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o src/cmdstan/main_threads.o        -Wl,-L,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/hyunjimoon/.cmdstan/cmdstan-2.30.1/stan/lib/stan_math/lib/tbb"   stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_nvecserial.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_cvodes.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_idas.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_kinsol.a  stan/lib/stan_math/lib/tbb/libtbb.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc_proxy.dylib -o /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws
rm -f /Users/hyunjimoon/Dropbox/tolzul/BayesSD/ContinuousCode/trust_factory/stanify/vignette/stan_files/2hier_s_asy_osc_S10N40Q2P3H0R1_M1000_ps0.1/data2draws.o

07:19:00 - cmdstanpy - INFO - CmdStan start processing
chain 1 |          | 00:00 Status
chain 2 |          | 00:00 Status

chain 3 |          | 00:00 Status


chain 4 |          | 00:00 Status
chain 2 |▋         | 00:00 Status

chain 3 |▋         | 00:00 Status


chain 1 |▋         | 00:00 Status

chain 3 |█▍        | 00:12 Iteration:    1 / 1250 [  0%]  (Warmup)


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chain 2 |█▍        | 13:02 Iteration:    1 / 1250 [  0%]  (Warmup)

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Worrying stan warning message during autodiff of integration #130

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Worrying stan warning message during autodiff of integration #130

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hyunjimoon Dec 17, 2022 Maintainer

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hyunjimoon
Dec 17, 2022
Maintainer