marvain/.github/workflows/ci.yml at 2a5805c0b855c4869693f1165b3e87d65a422ea6 · Daylily-Informatics/marvain · GitHub

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name: CI

on:
  pull_request:
  push:
    branches: [main]

permissions:
  contents: read

jobs:
  lint:
    name: Lint (ruff)
    runs-on: ubuntu-latest
    # Pre-existing lint issues: set to false once codebase is clean
    continue-on-error: true
    steps:
      - uses: actions/checkout@v4

      - uses: actions/setup-python@v5
        with:
          python-version: "3.11"

      - name: Install ruff
        run: pip install ruff

      - name: ruff check
        run: ruff check functions/ layers/ apps/ marvain_cli/ tests/

      - name: ruff format check
        run: ruff format --check functions/ layers/ apps/ marvain_cli/ tests/

  test:
    name: Tests (pytest)
    runs-on: ubuntu-latest
    env:
      PYTHONPATH: layers/shared/python
      HTTPS_ENABLED: "false"
      AWS_DEFAULT_REGION: us-east-1

    steps:
      - uses: actions/checkout@v4

      - uses: actions/setup-python@v5
        with:
          python-version: "3.11"

      - name: Install dependencies
        run: |
          pip install --upgrade pip
          pip install \
            boto3 \
            fastapi \
            mangum \
            uvicorn \
            jinja2 \
            requests \
            httpx \
            python-multipart \
            python-dateutil \
            python-jose[cryptography] \
            itsdangerous \
            websockets \
            python-dotenv \
            pyyaml \
            typer \
            click \
            pytest \
            pytest-cov

      - name: Run tests
        run: python -m pytest tests/ -q --tb=short