corecut/pyproject.toml at main · DessimozLab/corecut · GitHub

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[build-system]
requires = ["setuptools>=45", "wheel", "setuptools_scm"]
build-backend = "setuptools.build_meta"

[project]
name = "corecut"
version = "0.1.0"
description = "Extract structural cores from protein families using Foldseek"
readme = "README.md"
license = {text = "MIT"}
authors = [
    {name = "CoreCut Team", email = "dmoi@unil.ch"}
]
maintainers = [
    {name = "CoreCut Team", email = "dmoi@unil.ch"}
]
classifiers = [
    "Development Status :: 3 - Alpha",
    "Intended Audience :: Science/Research",
    "License :: OSI Approved :: MIT License",
    "Operating System :: OS Independent",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.8",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
]
keywords = ["bioinformatics", "protein", "structure", "foldseek", "core"]
requires-python = ">=3.8"
dependencies = [
    "pandas>=1.3.0",
    "numpy>=1.20.0",
    "biopython>=1.79",
    "tqdm>=4.60.0",
]

[project.optional-dependencies]
dev = [
    "pytest>=6.0",
    "pytest-cov",
    "black",
    "flake8",
    "mypy",
]

[project.urls]
Homepage = "https://github.com/DessimozLab/corecut"
Documentation = "https://github.com/DessimozLab/corecut#readme"
Repository = "https://github.com/DessimozLab/corecut"
"Bug Tracker" = "https://github.com/DessimozLab/corecut/issues"

[project.scripts]
corecut = "corecut.cli:main"

[tool.setuptools]
packages = ["corecut"]

[tool.setuptools.package-data]
corecut = ["py.typed"]

[tool.black]
line-length = 79
target-version = ['py38']

[tool.mypy]
python_version = "3.8"
warn_return_any = true
warn_unused_configs = true
disallow_untyped_defs = true