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Welcome to the read2tree wiki!

This wiki contains useful information for the read2tree package.

• The details of arguments

• How to obtain marker genes?

• Description of output files

• Expected output log

Read2Tree is a package to infer Multiple Sequence Alignment which could be used to infer thee species tree. The input of R2T is DNA/RNA sequencing reads.

 

You can see how different Read2Tree is compared to the standard pipeline in the following image.

 

Yo could also how it works and the intermediate files as follow