|
| 1 | +NpyString API |
| 2 | +============= |
| 3 | + |
| 4 | +.. sectionauthor:: Nathan Goldbaum |
| 5 | + |
| 6 | +.. versionadded:: 2.0 |
| 7 | + |
| 8 | +This API allows access to the UTF-8 string data stored in NumPy StringDType |
| 9 | +arrays. See `NEP-55 <https://numpy.org/neps/nep-0055-string_dtype.html>`_ for |
| 10 | +more in-depth details into the design of StringDType. |
| 11 | + |
| 12 | +Examples |
| 13 | +-------- |
| 14 | + |
| 15 | +Loading a String |
| 16 | +^^^^^^^^^^^^^^^^ |
| 17 | + |
| 18 | +Say we are writing a ufunc implementation for ``StringDType``. If we are given |
| 19 | +``const char *buf`` pointer to the beginning of a ``StringDType`` array entry, and a |
| 20 | +``PyArray_Descr *`` pointer to the array descriptor, one can |
| 21 | +access the underlying string data like so: |
| 22 | + |
| 23 | +.. code-block:: C |
| 24 | +
|
| 25 | + npy_string_allocator *allocator = NpyString_acquire_allocator( |
| 26 | + (PyArray_StringDTypeObject *)descr); |
| 27 | +
|
| 28 | + npy_static_string sdata = {0, NULL}; |
| 29 | + npy_packed_static_string *packed_string = (npy_packed_static_string *)buf; |
| 30 | + int is_null = 0; |
| 31 | +
|
| 32 | + is_null = NpyString_load(allocator, packed_string, &sdata); |
| 33 | +
|
| 34 | + if (is_null == -1) { |
| 35 | + // failed to load string, set error |
| 36 | + return -1; |
| 37 | + } |
| 38 | + else if (is_null) { |
| 39 | + // handle missing string |
| 40 | + // sdata->buf is NULL |
| 41 | + // sdata->size is 0 |
| 42 | + } |
| 43 | + else { |
| 44 | + // sdata->buf is a pointer to the beginning of a string |
| 45 | + // sdata->size is the size of the string |
| 46 | + } |
| 47 | + NpyString_release_allocator(allocator); |
| 48 | +
|
| 49 | +Packing a String |
| 50 | +^^^^^^^^^^^^^^^^ |
| 51 | + |
| 52 | +This example shows how to pack a new string entry into an array: |
| 53 | + |
| 54 | +.. code-block:: C |
| 55 | +
|
| 56 | + char *str = "Hello world"; |
| 57 | + size_t size = 11; |
| 58 | + npy_packed_static_string *packed_string = (npy_packed_static_string *)buf; |
| 59 | +
|
| 60 | + npy_string_allocator *allocator = NpyString_acquire_allocator( |
| 61 | + (PyArray_StringDTypeObject *)descr); |
| 62 | +
|
| 63 | + // copy contents of str into packed_string |
| 64 | + if (NpyString_pack(allocator, packed_string, str, size) == -1) { |
| 65 | + // string packing failed, set error |
| 66 | + return -1; |
| 67 | + } |
| 68 | +
|
| 69 | + // packed_string contains a copy of "Hello world" |
| 70 | +
|
| 71 | + NpyString_release_allocator(allocator); |
| 72 | +
|
| 73 | +Types |
| 74 | +----- |
| 75 | + |
| 76 | +.. c:type:: npy_packed_static_string |
| 77 | +
|
| 78 | + An opaque struct that represents "packed" encoded strings. Individual |
| 79 | + entries in array buffers are instances of this struct. Direct access |
| 80 | + to the data in the struct is undefined and future version of the library may |
| 81 | + change the packed representation of strings. |
| 82 | + |
| 83 | +.. c:type:: npy_static_string |
| 84 | +
|
| 85 | + An unpacked string allowing access to the UTF-8 string data. |
| 86 | + |
| 87 | + .. code-block:: c |
| 88 | +
|
| 89 | + typedef struct npy_unpacked_static_string { |
| 90 | + size_t size; |
| 91 | + const char *buf; |
| 92 | + } npy_static_string; |
| 93 | +
|
| 94 | + .. c:member:: size_t size |
| 95 | +
|
| 96 | + The size of the string, in bytes. |
| 97 | + |
| 98 | + .. c:member:: const char *buf |
| 99 | +
|
| 100 | + The string buffer. Holds UTF-8-encoded bytes. Does not currently end in |
| 101 | + a null string but we may decide to add null termination in the |
| 102 | + future, so do not rely on the presence or absence of null-termination. |
| 103 | + |
| 104 | + Note that this is a ``const`` buffer. If you want to alter an |
| 105 | + entry in an array, you should create a new string and pack it |
| 106 | + into the array entry. |
| 107 | + |
| 108 | +.. c:type:: npy_string_allocator |
| 109 | +
|
| 110 | + An opaque pointer to an object that handles string allocation. |
| 111 | + Before using the allocator, you must acquire the allocator lock and release |
| 112 | + the lock after you are done interacting with strings managed by the |
| 113 | + allocator. |
| 114 | + |
| 115 | +.. c:type:: PyArray_StringDTypeObject |
| 116 | +
|
| 117 | + The C struct backing instances of StringDType in Python. Attributes store |
| 118 | + the settings the object was created with, an instance of |
| 119 | + ``npy_string_allocator`` that manages string allocations for arrays |
| 120 | + associated with the DType instance, and several attributes caching |
| 121 | + information about the missing string object that is commonly needed in cast |
| 122 | + and ufunc loop implementations. |
| 123 | + |
| 124 | + .. code-block:: c |
| 125 | +
|
| 126 | + typedef struct { |
| 127 | + PyArray_Descr base; |
| 128 | + PyObject *na_object; |
| 129 | + char coerce; |
| 130 | + char has_nan_na; |
| 131 | + char has_string_na; |
| 132 | + char array_owned; |
| 133 | + npy_static_string default_string; |
| 134 | + npy_static_string na_name; |
| 135 | + npy_string_allocator *allocator; |
| 136 | + } PyArray_StringDTypeObject; |
| 137 | +
|
| 138 | + .. c:member:: PyArray_Descr base |
| 139 | +
|
| 140 | + The base object. Use this member to access fields common to all |
| 141 | + descriptor objects. |
| 142 | + |
| 143 | + .. c:member:: PyObject *na_object |
| 144 | +
|
| 145 | + A reference to the object representing the null value. If there is no |
| 146 | + null value (the default) this will be NULL. |
| 147 | + |
| 148 | + .. c:member:: char coerce |
| 149 | +
|
| 150 | + 1 if string coercion is enabled, 0 otherwise. |
| 151 | + |
| 152 | + .. c:member:: char has_nan_na |
| 153 | +
|
| 154 | + 1 if the missing string object (if any) is NaN-like, 0 otherwise. |
| 155 | + |
| 156 | + .. c:member:: char has_string_na |
| 157 | +
|
| 158 | + 1 if the missing string object (if any) is a string, 0 otherwise. |
| 159 | + |
| 160 | + .. c:member:: char array_owned |
| 161 | +
|
| 162 | + 1 if an array owns the StringDType instance, 0 otherwise. |
| 163 | + |
| 164 | + .. c:member:: npy_static_string default_string |
| 165 | +
|
| 166 | + The default string to use in operations. If the missing string object |
| 167 | + is a string, this will contain the string data for the missing string. |
| 168 | + |
| 169 | + .. c:member:: npy_static_string na_name |
| 170 | +
|
| 171 | + The name of the missing string object, if any. An empty string |
| 172 | + otherwise. |
| 173 | + |
| 174 | + .. c:member:: npy_string_allocator allocator |
| 175 | +
|
| 176 | + The allocator instance associated with the array that owns this |
| 177 | + descriptor instance. The allocator should only be directly accessed |
| 178 | + after acquiring the allocator_lock and the lock should be released |
| 179 | + immediately after the allocator is no longer needed |
| 180 | + |
| 181 | + |
| 182 | +Functions |
| 183 | +--------- |
| 184 | + |
| 185 | +.. c:function:: npy_string_allocator *NpyString_acquire_allocator( \ |
| 186 | + const PyArray_StringDTypeObject *descr) |
| 187 | +
|
| 188 | + Acquire the mutex locking the allocator attached to |
| 189 | + ``descr``. ``NpyString_release_allocator`` must be called on the allocator |
| 190 | + returned by this function exactly once. Note that functions requiring the |
| 191 | + GIL should not be called while the allocator mutex is held, as doing so may |
| 192 | + cause deadlocks. |
| 193 | +
|
| 194 | +.. c:function:: void NpyString_acquire_allocators( \ |
| 195 | + size_t n_descriptors, PyArray_Descr *const descrs[], \ |
| 196 | + npy_string_allocator *allocators[]) |
| 197 | +
|
| 198 | + Simultaneously acquire the mutexes locking the allocators attached to |
| 199 | + multiple descriptors. Writes a pointer to the associated allocator in the |
| 200 | + allocators array for each StringDType descriptor in the array. If any of |
| 201 | + the descriptors are not StringDType instances, write NULL to the allocators |
| 202 | + array for that entry. |
| 203 | +
|
| 204 | + ``n_descriptors`` is the number of descriptors in the descrs array that |
| 205 | + should be examined. Any descriptor after ``n_descriptors`` elements is |
| 206 | + ignored. A buffer overflow will happen if the ``descrs`` array does not |
| 207 | + contain n_descriptors elements. |
| 208 | +
|
| 209 | + If pointers to the same descriptor are passed multiple times, only acquires |
| 210 | + the allocator mutex once but sets identical allocator pointers appropriately. |
| 211 | + The allocator mutexes must be released after this function returns, see |
| 212 | + ``NpyString_release_allocators``. |
| 213 | +
|
| 214 | + Note that functions requiring the GIL should not be called while the |
| 215 | + allocator mutex is held, as doing so may cause deadlocks. |
| 216 | +
|
| 217 | +.. c:function:: void NpyString_release_allocator( \ |
| 218 | + npy_string_allocator *allocator) |
| 219 | +
|
| 220 | + Release the mutex locking an allocator. This must be called exactly once |
| 221 | + after acquiring the allocator mutex and all operations requiring the |
| 222 | + allocator are done. |
| 223 | +
|
| 224 | + If you need to release multiple allocators, see |
| 225 | + NpyString_release_allocators, which can correctly handle releasing the |
| 226 | + allocator once when given several references to the same allocator. |
| 227 | +
|
| 228 | +.. c:function:: void NpyString_release_allocators( \ |
| 229 | + size_t length, npy_string_allocator *allocators[]) |
| 230 | +
|
| 231 | + Release the mutexes locking N allocators. ``length`` is the length of the |
| 232 | + allocators array. NULL entries are ignored. |
| 233 | +
|
| 234 | + If pointers to the same allocator are passed multiple times, only releases |
| 235 | + the allocator mutex once. |
| 236 | +
|
| 237 | +.. c:function:: int NpyString_load(npy_string_allocator *allocator, \ |
| 238 | + const npy_packed_static_string *packed_string, \ |
| 239 | + npy_static_string *unpacked_string) |
| 240 | +
|
| 241 | + Extract the packed contents of ``packed_string`` into ``unpacked_string``. |
| 242 | +
|
| 243 | + The ``unpacked_string`` is a read-only view onto the ``packed_string`` data |
| 244 | + and should not be used to modify the string data. If ``packed_string`` is |
| 245 | + the null string, sets ``unpacked_string.buf`` to the NULL |
| 246 | + pointer. Returns -1 if unpacking the string fails, returns 1 if |
| 247 | + ``packed_string`` is the null string, and returns 0 otherwise. |
| 248 | +
|
| 249 | + A useful pattern is to define a stack-allocated npy_static_string instance |
| 250 | + initialized to ``{0, NULL}`` and pass a pointer to the stack-allocated |
| 251 | + unpacked string to this function. This function can be used to |
| 252 | + simultaneously unpack a string and determine if it is a null string. |
| 253 | +
|
| 254 | +.. c:function:: int NpyString_pack_null( \ |
| 255 | + npy_string_allocator *allocator, \ |
| 256 | + npy_packed_static_string *packed_string) |
| 257 | +
|
| 258 | + Pack the null string into ``packed_string``. Returns 0 on success and -1 on |
| 259 | + failure. |
| 260 | +
|
| 261 | +.. c:function:: int NpyString_pack( \ |
| 262 | + npy_string_allocator *allocator, \ |
| 263 | + npy_packed_static_string *packed_string, \ |
| 264 | + const char *buf, \ |
| 265 | + size_t size) |
| 266 | +
|
| 267 | + Copy and pack the first ``size`` entries of the buffer pointed to by ``buf`` |
| 268 | + into the ``packed_string``. Returns 0 on success and -1 on failure. |
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