Include padding in max slices and number of blocks calculations #166
Workflow file for this run
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| name: Tests on IRIS | |
| on: | |
| pull_request: | |
| branches: | |
| - main | |
| push: | |
| branches: | |
| - main | |
| jobs: | |
| iris-gpu: | |
| runs-on: iris-gpu | |
| container: | |
| image: nvidia/cuda:12.6.3-devel-ubi8 | |
| env: | |
| NVIDIA_VISIBLE_DEVICES: ${{ env.NVIDIA_VISIBLE_DEVICES }} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: Checkout repository code | |
| uses: actions/checkout@v4 | |
| - name: Create conda environment | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-name: httomo | |
| create-args: >- | |
| cupy==12.3.0 | |
| h5py=*=*mpi_openmpi* | |
| mpi4py | |
| tomopy==1.15 | |
| post-cleanup: 'all' | |
| init-shell: bash | |
| - name: Install httomo libraries and httomo | |
| run: | | |
| micromamba activate httomo | |
| pip install .[dev-gpu] | |
| micromamba list | |
| - name: Generate full yaml pipelines using pipeline directives | |
| run: | | |
| pip install "ruamel.yaml>0.18.0" | |
| python ./docs/source/scripts/execute_pipelines_build.py -o ./docs/source/pipelines_full/ | |
| - name: Run HTTomo framework tests | |
| run: | | |
| pytest tests/ | |
| - name: Run HTTomo pipelines tests (small data) | |
| run: | | |
| pytest tests/test_pipeline_small.py --small_data |