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KarlLevik
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Update database sql files (#214)
Co-authored-by: KarlLevik <[email protected]>
1 parent 57c51a2 commit 70fe2e1

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‎schemas/ispyb/data.sql‎

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@@ -9,27 +9,12 @@
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/*!40101 SET @OLD_SQL_MODE=@@SQL_MODE, SQL_MODE='NO_AUTO_VALUE_ON_ZERO' */;
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/*!40111 SET @OLD_SQL_NOTES=@@SQL_NOTES, SQL_NOTES=0 */;
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/*!40000 ALTER TABLE `AbInitioModel` DISABLE KEYS */;
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/*!40000 ALTER TABLE `AbInitioModel` ENABLE KEYS */;
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/*!40000 ALTER TABLE `Additive` DISABLE KEYS */;
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/*!40000 ALTER TABLE `Additive` ENABLE KEYS */;
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/*!40000 ALTER TABLE `AdminActivity` DISABLE KEYS */;
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/*!40000 ALTER TABLE `AdminActivity` ENABLE KEYS */;
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/*!40000 ALTER TABLE `Aperture` DISABLE KEYS */;
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/*!40000 ALTER TABLE `Aperture` ENABLE KEYS */;
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/*!40000 ALTER TABLE `Assembly` DISABLE KEYS */;
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/*!40000 ALTER TABLE `Assembly` ENABLE KEYS */;
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/*!40000 ALTER TABLE `AssemblyHasMacromolecule` DISABLE KEYS */;
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/*!40000 ALTER TABLE `AssemblyHasMacromolecule` ENABLE KEYS */;
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/*!40000 ALTER TABLE `AssemblyRegion` DISABLE KEYS */;
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/*!40000 ALTER TABLE `AssemblyRegion` ENABLE KEYS */;
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/*!40000 ALTER TABLE `AutoProc` DISABLE KEYS */;
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INSERT INTO `AutoProc` (`autoProcId`, `autoProcProgramId`, `spaceGroup`, `refinedCell_a`, `refinedCell_b`, `refinedCell_c`, `refinedCell_alpha`, `refinedCell_beta`, `refinedCell_gamma`, `recordTimeStamp`) VALUES (596406,56425592,'P 6 2 2',92.5546,92.5546,129.784,90,90,120,'2016-01-14 12:46:22'),
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(596411,56425944,'P 63 2 2',92.53,92.53,129.75,90,90,120,'2016-01-14 13:09:51'),
@@ -282,12 +267,12 @@ INSERT INTO `BLSample_has_DataCollectionPlan` (`blSampleId`, `dataCollectionPlan
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/*!40000 ALTER TABLE `BLSample_has_Positioner` ENABLE KEYS */;
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/*!40000 ALTER TABLE `BLSession` DISABLE KEYS */;
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INSERT INTO `BLSession` (`sessionId`, `beamLineSetupId`, `proposalId`, `beamCalendarId`, `projectCode`, `startDate`, `endDate`, `beamLineName`, `scheduled`, `nbShifts`, `comments`, `beamLineOperator`, `bltimeStamp`, `visit_number`, `usedFlag`, `sessionTitle`, `structureDeterminations`, `dewarTransport`, `databackupFrance`, `databackupEurope`, `expSessionPk`, `operatorSiteNumber`, `lastUpdate`, `protectedData`, `externalId`, `archived`, `riskRating`) VALUES (55167,1,37027,NULL,NULL,'2016-01-01 09:00:00','2016-01-01 17:00:00','i03',NULL,NULL,'ghfg',NULL,'2015-12-21 15:20:43',1,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,'0000-00-00 00:00:00',NULL,NULL,0,NULL),
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(55168,1,37027,NULL,NULL,'2016-03-11 09:00:00','2016-03-11 17:00:00','i03',NULL,NULL,'jhgjh',NULL,'2015-12-21 15:20:44',2,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,'0000-00-00 00:00:00',NULL,NULL,0,NULL),
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(339525,NULL,141666,NULL,NULL,NULL,NULL,'i03',NULL,NULL,NULL,NULL,'2016-03-16 16:08:29',1,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,'0000-00-00 00:00:00',NULL,NULL,0,NULL),
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(339535,NULL,37027,NULL,NULL,'2018-03-27 09:00:00','2018-07-27 09:00:00','i02-2',NULL,NULL,NULL,NULL,'2018-04-05 15:48:37',99,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,'0000-00-00 00:00:00',NULL,NULL,0,NULL);
270+
INSERT INTO `BLSession` (`sessionId`, `beamLineSetupId`, `proposalId`, `beamCalendarId`, `startDate`, `endDate`, `beamLineName`, `scheduled`, `nbShifts`, `comments`, `beamLineOperator`, `bltimeStamp`, `visit_number`, `usedFlag`, `lastUpdate`, `externalId`, `archived`, `riskRating`) VALUES (55167,1,37027,NULL,'2016-01-01 09:00:00','2016-01-01 17:00:00','i03',NULL,NULL,'ghfg',NULL,'2015-12-21 15:20:43',1,NULL,'0000-00-00 00:00:00',NULL,0,NULL),
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(55168,1,37027,NULL,'2016-03-11 09:00:00','2016-03-11 17:00:00','i03',NULL,NULL,'jhgjh',NULL,'2015-12-21 15:20:44',2,NULL,'0000-00-00 00:00:00',NULL,0,NULL),
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(339525,NULL,141666,NULL,NULL,NULL,'i03',NULL,NULL,NULL,NULL,'2016-03-16 16:08:29',1,NULL,'0000-00-00 00:00:00',NULL,0,NULL),
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(339528,NULL,141666,NULL,NULL,NULL,'i03',NULL,NULL,NULL,NULL,'2016-03-17 15:07:42',2,NULL,'0000-00-00 00:00:00',NULL,0,NULL),
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(339531,NULL,141666,NULL,NULL,NULL,'i03',NULL,NULL,NULL,NULL,'2016-03-17 15:08:09',3,NULL,'0000-00-00 00:00:00',NULL,0,NULL),
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(339535,NULL,37027,NULL,'2018-03-27 09:00:00','2018-07-27 09:00:00','i02-2',NULL,NULL,NULL,NULL,'2018-04-05 15:48:37',99,NULL,'0000-00-00 00:00:00',NULL,0,NULL);
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/*!40000 ALTER TABLE `BLSession_has_SCPosition` DISABLE KEYS */;
@@ -320,12 +305,6 @@ INSERT INTO `BeamLineSetup` (`beamLineSetupId`, `detectorId`, `synchrotronMode`,
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/*!40000 ALTER TABLE `BeamlineStats` DISABLE KEYS */;
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/*!40000 ALTER TABLE `Buffer` DISABLE KEYS */;
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/*!40000 ALTER TABLE `Buffer` ENABLE KEYS */;
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/*!40000 ALTER TABLE `BufferHasAdditive` DISABLE KEYS */;
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/*!40000 ALTER TABLE `CTF` DISABLE KEYS */;
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/*!40000 ALTER TABLE `CTF` ENABLE KEYS */;
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@@ -439,21 +418,18 @@ INSERT INTO `DataCollection` (`dataCollectionId`, `BLSAMPLEID`, `SESSIONID`, `ex
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/*!40000 ALTER TABLE `DataCollectionFileAttachment` ENABLE KEYS */;
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/*!40000 ALTER TABLE `DataCollectionGroup` DISABLE KEYS */;
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INSERT INTO `DataCollectionGroup` (`dataCollectionGroupId`, `sessionId`, `comments`, `blSampleId`, `experimentType`, `startTime`, `endTime`, `crystalClass`, `detectorMode`, `actualSampleBarcode`, `actualSampleSlotInContainer`, `actualContainerBarcode`, `actualContainerSlotInSC`, `workflowId`, `xtalSnapshotFullPath`, `scanParameters`, `experimentTypeId`) VALUES (988855,55167,NULL,374695,'SAD',NULL,NULL,NULL,'Ext. Trigger','HA00AU3712',NULL,NULL,NULL,NULL,NULL,NULL,NULL),
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(996311,55167,NULL,NULL,'SAD',NULL,NULL,NULL,'Ext. Trigger',NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL),
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(1040398,55168,NULL,NULL,'SAD',NULL,NULL,NULL,'Ext. Trigger',NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL),
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(1040407,55168,NULL,NULL,'SAD',NULL,NULL,NULL,'Ext. Trigger',NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL),
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(1054243,55168,NULL,398810,'SAD',NULL,NULL,NULL,'Ext. Trigger','CA00AG9993',NULL,NULL,NULL,NULL,NULL,NULL,NULL),
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(5440739,55167,NULL,374695,'Mesh',NULL,NULL,NULL,NULL,'NR',NULL,NULL,NULL,NULL,NULL,NULL,NULL);
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INSERT INTO `DataCollectionGroup` (`dataCollectionGroupId`, `sessionId`, `comments`, `blSampleId`, `experimentType`, `startTime`, `endTime`, `crystalClass`, `detectorMode`, `actualSampleBarcode`, `actualSampleSlotInContainer`, `actualContainerBarcode`, `actualContainerSlotInSC`, `xtalSnapshotFullPath`, `scanParameters`, `experimentTypeId`) VALUES (988855,55167,NULL,374695,'SAD',NULL,NULL,NULL,'Ext. Trigger','HA00AU3712',NULL,NULL,NULL,NULL,NULL,NULL),
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(996311,55167,NULL,NULL,'SAD',NULL,NULL,NULL,'Ext. Trigger',NULL,NULL,NULL,NULL,NULL,NULL,NULL),
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(1040407,55168,NULL,NULL,'SAD',NULL,NULL,NULL,'Ext. Trigger',NULL,NULL,NULL,NULL,NULL,NULL,NULL),
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(1054243,55168,NULL,398810,'SAD',NULL,NULL,NULL,'Ext. Trigger','CA00AG9993',NULL,NULL,NULL,NULL,NULL,NULL),
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(5440739,55167,NULL,374695,'Mesh',NULL,NULL,NULL,NULL,'NR',NULL,NULL,NULL,NULL,NULL,NULL);
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INSERT INTO `DataCollectionPlan_has_Detector` (`dataCollectionPlanHasDetectorId`, `dataCollectionPlanId`, `detectorId`, `exposureTime`, `distance`, `roll`) VALUES (4,197792,8,5.4,136.86,45);
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INSERT INTO `Dewar` (`dewarId`, `shippingId`, `code`, `comments`, `storageLocation`, `dewarStatus`, `bltimeStamp`, `isStorageDewar`, `barCode`, `firstExperimentId`, `customsValue`, `transportValue`, `trackingNumberToSynchrotron`, `trackingNumberFromSynchrotron`, `type`, `facilityCode`, `weight`, `deliveryAgent_barcode`, `extra`) VALUES (573,474,'Dewar-1-cm0001-1',NULL,NULL,'processing',NULL,0,'dewar-cm0001-1-0000001',NULL,NULL,NULL,NULL,NULL,'Dewar',NULL,NULL,NULL,NULL),
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(576,474,'Dewar-2-cm0001-1',NULL,NULL,'at DLS',NULL,0,'dewar-cm0001-1-0000002',NULL,NULL,NULL,NULL,NULL,'Dewar',NULL,NULL,NULL,NULL),
@@ -485,9 +461,6 @@ INSERT INTO `DiffractionPlan` (`diffractionPlanId`, `name`, `experimentKind`, `o
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(197792,'XPDF-1',NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,0,NULL,0,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,'2017-03-22 10:56:32',NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL);
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/*!40000 ALTER TABLE `EMMicroscope` DISABLE KEYS */;
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INSERT INTO `EnergyScan` (`energyScanId`, `sessionId`, `blSampleId`, `fluorescenceDetector`, `scanFileFullPath`, `jpegChoochFileFullPath`, `element`, `startEnergy`, `endEnergy`, `transmissionFactor`, `exposureTime`, `axisPosition`, `synchrotronCurrent`, `temperature`, `peakEnergy`, `peakFPrime`, `peakFDoublePrime`, `inflectionEnergy`, `inflectionFPrime`, `inflectionFDoublePrime`, `xrayDose`, `startTime`, `endTime`, `edgeEnergy`, `filename`, `beamSizeVertical`, `beamSizeHorizontal`, `choochFileFullPath`, `crystalClass`, `comments`, `flux`, `flux_end`, `workingDirectory`, `blSubSampleId`) VALUES (49661,55167,NULL,'Vortex1_MCAScaler','/dls/i03/data/2016/cm14451-1/fe1.fluo','/dls/i03/data/2016/cm14451-1/fluorescence_scans/fe1_chooch.png','Fe',7062.75,7170.88,0.016,1,NULL,298.569,100,7115.73,-4.79,4.66,7095.13,-7.26,1.66,0,'2016-01-12 14:51:20','2016-01-12 14:58:33','K',NULL,20,50,NULL,NULL,NULL,NULL,NULL,NULL,NULL),
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(49662,55167,NULL,'Vortex1_MCAScaler','/dls/i03/data/2016/cm14451-1/fe1.fluo','/dls/i03/data/2016/cm14451-1/fluorescence_scans/fe1_chooch.png','Fe',7062.75,7170.88,0.256,1,NULL,299.986,100,7131.44,-6.26,5.1,7122.6,-8.69,2.52,0,'2016-01-12 15:00:34','2016-01-12 15:05:28','K',NULL,20,50,NULL,NULL,NULL,NULL,NULL,NULL,NULL),
@@ -524,24 +497,9 @@ INSERT INTO `EnergyScan` (`energyScanId`, `sessionId`, `blSampleId`, `fluorescen
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@@ -574,12 +532,6 @@ INSERT INTO `ImageQualityIndicators` (`dataCollectionId`, `imageNumber`, `imageI
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(1066786,3,284718118,NULL,922,922,735,0,1.57,1.57,0,0,0,0,NULL,2.13,NULL,NULL);
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@@ -592,9 +544,6 @@ INSERT INTO `ImageQualityIndicators` (`dataCollectionId`, `imageNumber`, `imageI
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INSERT INTO `MXMRRun` (`mxMRRunId`, `autoProcScalingId`, `rValueStart`, `rValueEnd`, `rFreeValueStart`, `rFreeValueEnd`, `LLG`, `TFZ`, `spaceGroup`, `autoProcProgramId`) VALUES (672897,603470,0.1812,0.1682,0.1896,0.1888,NULL,NULL,NULL,56986674),
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@@ -603,36 +552,9 @@ INSERT INTO `MXMRRun` (`mxMRRunId`, `autoProcScalingId`, `rValueStart`, `rValueE
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@@ -652,12 +574,6 @@ INSERT INTO `PDB` (`pdbId`, `name`, `contents`, `code`, `source`) VALUES (6,'ceo
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@@ -697,12 +613,6 @@ INSERT INTO `Person` (`personId`, `laboratoryId`, `siteId`, `personUUID`, `famil
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INSERT INTO `Position` (`positionId`, `relativePositionId`, `posX`, `posY`, `posZ`, `scale`, `recordTimeStamp`, `X`, `Y`, `Z`) VALUES (2,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL,NULL),
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@@ -795,42 +705,15 @@ INSERT INTO `Protein_has_PDB` (`proteinhaspdbid`, `proteinid`, `pdbid`) VALUES (
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INSERT INTO `ScanParametersModel` (`scanParametersModelId`, `scanParametersServiceId`, `dataCollectionPlanId`, `sequenceNumber`, `start`, `stop`, `step`, `array`, `duration`) VALUES (4,4,197788,1,0,90,10,NULL,NULL),
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@@ -1076,15 +941,6 @@ INSERT INTO `ShippingHasSession` (`shippingId`, `sessionId`) VALUES (474,339525)
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‎schemas/ispyb/lookups.sql‎

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@@ -239,7 +239,11 @@ INSERT INTO `SchemaStatus` (`schemaStatusId`, `scriptName`, `schemaStatus`, `rec
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(264,'2023_10_24_BLSession_add_riskRating.sql','DONE','2023-10-26 15:50:26'),
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(265,'2023_10_26_BFactorFit_and_new_cols.sql','DONE','2023-10-26 15:50:26'),
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(266,'2023_10_27_BFactorFit_particleClassification_not_null.sql','DONE','2023-10-27 11:28:51'),
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(267,'2023_10_31_BLSession_modify_beamlineOperator.sql','DONE','2023-10-31 11:58:22');
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(267,'2023_10_31_BLSession_modify_beamlineOperator.sql','DONE','2023-10-31 11:58:22'),
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(269,'2024_01_02_drop_bioSAXS.sql','DONE','2024-01-08 15:41:22'),
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(270,'2024_01_02_drop_views.sql','DONE','2024-01-08 15:41:22'),
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(271,'2024_01_04_BLSession_drop_cols.sql','DONE','2024-01-08 15:41:22'),
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(272,'2024_01_04_drop_unused_tables.sql','DONE','2024-01-08 15:41:22');
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@@ -361,12 +365,6 @@ INSERT INTO `InspectionType` (`inspectionTypeId`, `name`) VALUES (1,'Visible'),
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(2,'UV');
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INSERT INTO `Schedule` (`scheduleId`, `name`) VALUES (1,'Daily - 1 week'),
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(2,'Schedule 2'),

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