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Remove apo datasets from PanDDA2 analysis
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src/dlstbx/services/trigger_xchem.py

Lines changed: 2 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -617,8 +617,9 @@ def trigger_pandda_xchem(
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return {"success": True}
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elif not CompoundSMILES:
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self.log.info(
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f"Puck {code}, puck position {location} has no corresponding CompoundSMILES, considering as an apo dataset"
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f"Puck {code}, puck position {location} has no corresponding CompoundSMILES, apo dataset? Skipping..."
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)
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return {"success": True}
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# 3. Create the dataset directory
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tmp_dir = pathlib.Path("/dls/tmp/xchem_diff2ir") # TEMPORARY RESULTS DIR

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