Refactored CLEM Murfey workflows

Author: tieneupin

pyproject.toml

@@ -94,9 +94,11 @@ murfey = "murfey.client:run"
 "murfey.transfer" = "murfey.cli.transfer:run"
 [project.entry-points."murfey.auth.token_validation"]
 "password" = "murfey.server.api.auth:password_token_validation"
-[project.entry-points."murfey.workflows"]
-"lif_to_stack" = "murfey.workflows.lif_to_stack:zocalo_cluster_request"
-"tiff_to_stack" = "murfey.workflows.tiff_to_stack:zocalo_cluster_request"
+[project.entry-points."murfey.workflows.clem"]
+"lif_to_stack" = "murfey.workflows.clem.lif_to_stack:zocalo_cluster_request"
+"register_lif_preprocessing_result" = "murfey.workflows.clem.register_results:register_lif_preprocessing_result"
+"register_tiff_preprocessing_result" = "murfey.workflows.clem.register_results:register_tiff_preprocessing_result"
+"tiff_to_stack" = "murfey.workflows.clem.tiff_to_stack:zocalo_cluster_request"
 
 [tool.setuptools]
 package-dir = {"" = "src"}

src/murfey/workflows/clem/__init__.py

@@ -0,0 +1,22 @@
+"""
+Functions to process the requests received by Murfey related to the CLEM workflow.
+
+The CLEM-related file registration API endpoints can eventually be moved here, since
+the file registration processes all take place on the server side only.
+"""
+
+
+def register_lif_preprocessing_result(message: dict):
+    """
+    session_id (recipe)
+    register (wrapper)
+    output_files (wrapper)
+        key1
+        key2
+        ...
+    """
+    pass
+
+
+def register_tiff_preprocessing_result(message: dict):
+    pass