Merged recent changes from 'main' branch

Author: tieneupin

.bumpclient.toml

@@ -1,5 +1,5 @@
 [tool.bumpversion]
-current_version = "0.19.2"
+current_version = "0.19.3"
 commit = true
 tag = false
 

.bumpversion.toml

@@ -1,5 +1,5 @@
 [tool.bumpversion]
-current_version = "0.19.2"
+current_version = "0.19.3"
 commit = true
 tag = true
 

Helm/Chart.yaml

@@ -1,7 +1,7 @@
 apiVersion: v1
 name: murfey-services
 description: Umbrella Helm chart for deploying the servers and daemons needed to enable Murfey to transfer and process data
-version: 0.19.2
+version: 0.19.3
 dependencies:
   - name: murfey-instrument-server-clem
   - name: murfey-instrument-server-tem

Helm/charts/murfey-instrument-server-clem/Chart.yaml

@@ -1,4 +1,4 @@
 apiVersion: v1
 name: murfey-instrument-server-clem
 description: Helm chart for deploying a Murfey instrument server, which executes orders to detect, modify, and transfer files on the instrument PC, and notifies the backend server about transferred files
-version: 0.19.2
+version: 0.19.3

Helm/charts/murfey-instrument-server-tem/Chart.yaml

@@ -1,4 +1,4 @@
 apiVersion: v1
 name: murfey-instrument-server-tem
 description: Helm chart for deploying a Murfey instrument server, which executes orders to detect, modify, and transfer files on the instrument PC, and notifies the backend server about transferred files
-version: 0.19.2
+version: 0.19.3

Helm/charts/murfey-rsync/Chart.yaml

@@ -1,4 +1,4 @@
 apiVersion: v1
 name: murfey-rsync
 description: Helm chart for deploying an rsync daemon, which is responsible for executing the transfer of files from the client storage directory to the server storage system
-version: 0.19.2
+version: 0.19.3

Helm/charts/murfey-server/Chart.yaml

@@ -1,4 +1,4 @@
 apiVersion: v1
 name: murfey-server
 description: Helm chart for deploying a Murfey backend server, which is responsible for orchestrating the data transfer and processing workflow between the client PC and the storage system
-version: 0.19.2
+version: 0.19.3

pyproject.toml

@@ -7,7 +7,7 @@ requires = [
 
 [project]
 name = "murfey"
-version = "0.19.2"
+version = "0.19.3"
 description = "Client-Server architecture hauling Cryo-EM data"
 readme = "README.md"
 keywords = [

src/murfey/__init__.py

@@ -1,4 +1,4 @@
 from __future__ import annotations
 
-__version__ = "0.19.2"
-__supported_client_version__ = "0.19.2"
+__version__ = "0.19.3"
+__supported_client_version__ = "0.19.3"

src/murfey/client/analyser.py

@@ -149,6 +149,10 @@ def _find_context(self, file_path: Path) -> bool:
         # Tomography and SPA workflow checks
         split_file_name = file_path.name.split("_")
         if split_file_name:
+            # Skip context for gain files
+            if "gain" in split_file_name[-1]:
+                return False
+
             # Files starting with "FoilHole" belong to the SPA workflow
             if split_file_name[0].startswith("FoilHole"):
                 if not self._context: