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Initial commit: creating knowledge-base-sandbox
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.gitignore

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.vscode/settings.json

.gitlab-ci.yml

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---
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variables:
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HITS_DEPLOY:
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description: Deploy to this environment
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value: test
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DOWNSTREAM_PROJECT:
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description: The project id in gitlab that you want to kick off
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value: "4621"
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default:
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image: google/cloud-sdk:latest
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tags:
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- shared
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stages:
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- build
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- trigger
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downstream-trigger-curl:
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stage: trigger
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script:
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- >-
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curl --request POST
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--form "token=$CI_JOB_TOKEN"
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--form ref=main
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--form "variables[HITS_DEPLOY]=$HITS_DEPLOY"
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"https://git.umms.med.umich.edu/api/v4/projects/$DOWNSTREAM_PROJECT/trigger/pipeline"

LICENSE.txt

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causal_pathways/goal_approach.json

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{
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"name": "https://schema.metadatacenter.org/properties/4a88e066-a289-4a09-a0fc-a24c28c65215",
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"description": "https://schema.metadatacenter.org/properties/989a48cd-1da8-4332-ac53-a7a9a773e026",
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"Outcomes": "https://schema.metadatacenter.org/properties/5e5d9c40-bca5-4142-9c2e-96ab3f768a10",
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"Mechanisms": "https://schema.metadatacenter.org/properties/facca32e-9ce9-4bde-a20c-0bb6fcea5114",
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},
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"name": {
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"@value": "Goal Approach"
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},
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"description": {
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"@value": "The pathway \"goal approach\" describes the influence of feedback interventions that show the message recipient that their performance is improving, and is approaching an explicit performance goal. This goal is institutional, and invariate with changes to peer performance. The goal approach causal pathway model is made up of preconditions, moderators, mechanisms, and outcomes."
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},
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"Moderators": [
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{
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"@value": "regulatory fit"
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},
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{
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"@value": "gap size"
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},
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{
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"@value": "slope of trend"
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},
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{
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"@value": "message recency"
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},
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{
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"@value": "message delivery count"
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}
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],
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"Outcomes": {
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"@value": "Clinical process performance improvement"
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},
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"Mechanisms": {
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"@value": "Awareness (knowledge), Goals, Motivation, Optimism"
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},
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"Has precondition": [
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000094",
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"rdfs:label": "goal comparator content"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000105",
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"rdfs:label": "negative performance gap content"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000099",
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"rdfs:label": "positive performance trend content"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000046",
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"rdfs:label": "goal comparator element"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000116",
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"rdfs:label": "negative performance gap set"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000120",
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"rdfs:label": "positive performance trend set"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000201",
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"rdfs:label": "approach content"
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"schema:name": "Goal Approach",
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causal_pathways/goal_gain.json

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{
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"@context": {
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"rdfs": "http://www.w3.org/2000/01/rdf-schema#",
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"xsd": "http://www.w3.org/2001/XMLSchema#",
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"pav": "http://purl.org/pav/",
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"schema": "http://schema.org/",
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"oslc": "http://open-services.net/ns/core#",
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"skos": "http://www.w3.org/2004/02/skos/core#",
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"type": "https://schema.metadatacenter.org/properties/827f2744-2cb7-439d-a8d3-cdd3a6fc7a4c",
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"name": "https://schema.metadatacenter.org/properties/4a88e066-a289-4a09-a0fc-a24c28c65215",
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"description": "https://schema.metadatacenter.org/properties/989a48cd-1da8-4332-ac53-a7a9a773e026",
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"Moderators": "https://schema.metadatacenter.org/properties/c93ed038-0c67-4add-99c8-d1a0f1c0a864",
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"Outcomes": "https://schema.metadatacenter.org/properties/5e5d9c40-bca5-4142-9c2e-96ab3f768a10",
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"Mechanisms": "https://schema.metadatacenter.org/properties/facca32e-9ce9-4bde-a20c-0bb6fcea5114",
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"Has precondition": "http://purl.bioontology.org/ontology/SNOMEDCT/has_precondition"
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},
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"type": {
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"@value": "http://purl.obolibrary.org/obo/cpo_0000029"
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},
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"name": {
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"@value": "Goal Gain"
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},
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"description": {
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"@value": "The goal gain causal pathway describes the influence of feedback interventions that show the recipient that their performance is better than that of an explicit goal, such as the performance threshold set by MPOG. The causal pathway model is made up of preconditions, moderators, mechanisms, and outcomes."
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},
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"Moderators": [
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{
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"@value": "regulatory fit"
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},
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{
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"@value": "gap size"
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},
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{
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"@value": "slope of trend"
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},
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{
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"@value": "time since last loss"
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},
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{
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"@value": "message recency"
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},
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{
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"@value": "message delivery count"
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}
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],
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"Outcomes": {
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"@value": "Clinical process performance improvement or sustainment"
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},
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"Mechanisms": {
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"@value": "Awareness (knowledge), Goals, Motivation"
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},
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"Has precondition": [
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000094",
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"rdfs:label": "goal comparator content"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000104",
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"rdfs:label": "positive performance gap content"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000099",
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"rdfs:label": "positive performance trend content"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000112",
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"rdfs:label": "achievement content"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000046",
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"rdfs:label": "goal comparator element"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000117",
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"rdfs:label": "positive performance gap set"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000120",
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"rdfs:label": "positive performance trend set"
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},
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000121",
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"rdfs:label": "achievement set"
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}
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],
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"schema:isBasedOn": "https://repo.metadatacenter.org/templates/2c8ca8b3-868b-4b65-aabf-1ed955b024c2",
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"schema:name": "Goal Gain",
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"schema:description": "",
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"pav:createdOn": "2023-08-01T15:45:03-07:00",
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"pav:createdBy": "https://metadatacenter.org/users/da882240-ad9e-42ea-a48b-215e54161ad3",
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"pav:lastUpdatedOn": "2023-08-03T14:51:02-07:00",
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"@id": "https://repo.metadatacenter.org/template-instances/deb62b84-bd40-4729-84ca-bf099cc2c07e"
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}

causal_pathways/goal_loss.json

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{
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"@context": {
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"rdfs": "http://www.w3.org/2000/01/rdf-schema#",
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"xsd": "http://www.w3.org/2001/XMLSchema#",
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"pav": "http://purl.org/pav/",
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"schema": "http://schema.org/",
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"oslc": "http://open-services.net/ns/core#",
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"skos": "http://www.w3.org/2004/02/skos/core#",
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"rdfs:label": {
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"type": "https://schema.metadatacenter.org/properties/827f2744-2cb7-439d-a8d3-cdd3a6fc7a4c",
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"name": "https://schema.metadatacenter.org/properties/4a88e066-a289-4a09-a0fc-a24c28c65215",
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"description": "https://schema.metadatacenter.org/properties/989a48cd-1da8-4332-ac53-a7a9a773e026",
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"Outcomes": "https://schema.metadatacenter.org/properties/5e5d9c40-bca5-4142-9c2e-96ab3f768a10",
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"Mechanisms": "https://schema.metadatacenter.org/properties/facca32e-9ce9-4bde-a20c-0bb6fcea5114",
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"Has precondition": "http://purl.bioontology.org/ontology/SNOMEDCT/has_precondition"
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},
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"type": {
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"@value": "http://purl.obolibrary.org/obo/cpo_0000029"
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},
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"name": {
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"@value": "Goal Loss"
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},
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"description": {
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"@value": "The pathway \"goal loss\" describes the influence of feedback interventions that show the message recipient that their performance has fallen below an explicit performance goal, assigned independently of institutional peer performance. The goal loss causal pathway model is made up of preconditions, moderators, mechanisms, and outcomes."
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},
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"Moderators": [
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{
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"@value": "regulatory fit"
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},
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{
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"@value": "gap size"
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},
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{
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"@value": "slope of trend"
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},
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{
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"@value": "time since last achievement"
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},
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{
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"@value": "message recency"
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},
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{
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"@value": "message delivery count"
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}
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],
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"Outcomes": {
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"@value": "Clinical process performance improvement"
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},
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"Mechanisms": {
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"@value": "Awareness (knowledge), Goals, Motivation"
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},
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"Has precondition": [
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000094",
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"rdfs:label": "goal comparator content"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000105",
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"rdfs:label": "negative performance gap content"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000100",
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"rdfs:label": "negative performance trend content"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000113",
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"rdfs:label": "loss content"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000046",
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"rdfs:label": "goal comparator element"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000116",
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"rdfs:label": "negative performance gap set"
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},
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{
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000119",
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"rdfs:label": "negative performance trend set"
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"@id": "http://purl.obolibrary.org/obo/PSDO_0000122",
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"rdfs:label": "loss set"
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],
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"schema:isBasedOn": "https://repo.metadatacenter.org/templates/2c8ca8b3-868b-4b65-aabf-1ed955b024c2",
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"schema:name": "Goal Loss",
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"schema:description": "",
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"pav:createdOn": "2023-08-02T09:06:43-07:00",
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"pav:createdBy": "https://metadatacenter.org/users/da882240-ad9e-42ea-a48b-215e54161ad3",
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"@id": "https://repo.metadatacenter.org/template-instances/d3159028-f58f-4bc2-bc44-8279263db82b"
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}

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