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Copy file name to clipboardExpand all lines: vignettes/worsening_vignette/readme.md
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@@ -123,14 +123,15 @@ The `Getting Worse` [<sub>(GH)</sub>](https://github.com/Display-Lab/knowledge-b
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This message template `is about`[<sub>(OntoBee)</sub>](https://ontobee.org/ontology/IAO?iri=http://purl.obolibrary.org/obo/IAO_0000136) the following data features:
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1.[Negative performance trend set <sub>(BP)</sub>](https://bioportal.bioontology.org/ontologies/PSDO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FPSDO_0000045)
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2. Display format compatability: [Line Graph <sub>(BP)</sub>](https://bioportal.bioontology.org/ontologies/IAO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FIAO_0000573), [Bar Chart <sub>(BP)</sub>](https://bioportal.bioontology.org/ontologies/STATO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSTATO_0000166)
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2. Display format compatibility: [Line Graph <sub>(BP)</sub>](https://bioportal.bioontology.org/ontologies/IAO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FIAO_0000573), [Bar Chart <sub>(BP)</sub>](https://bioportal.bioontology.org/ontologies/STATO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSTATO_0000166)
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The `Performance Dropped`[<sub>(GH)</sub>](https://github.com/Display-Lab/knowledge-base/blob/main/message_templates/performance_dropped.json) message reads:
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> Your performance dropped this month for the measure [measure name].
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This message template `is about`[<sub>(OntoBee)</sub>](https://ontobee.org/ontology/IAO?iri=http://purl.obolibrary.org/obo/IAO_0000136) the following data features:
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1.[Negative performance trend set <sub>(BP)</sub>](https://bioportal.bioontology.org/ontologies/PSDO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FPSDO_0000119)
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2. Display format compatability: [Line Graph <sub>(BP)</sub>](https://bioportal.bioontology.org/ontologies/IAO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FIAO_0000573), [Bar Chart <sub>(BP)</sub>](https://bioportal.bioontology.org/ontologies/STATO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSTATO_0000166)
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2. Display format compatibility: [Line Graph <sub>(BP)</sub>](https://bioportal.bioontology.org/ontologies/IAO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FIAO_0000573), [Bar Chart <sub>(BP)</sub>](https://bioportal.bioontology.org/ontologies/STATO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSTATO_0000166)
The first stage of the pipeline is a script called Bitstomach. This script analyzes recipient's performance data and generates features called **annotations**. These annotations describe features of the performance data such as performance trends over time, or how performance measures relate to other values like peer performance benchmarks and institutional performance goals.
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