use nf-core tRNA: https://github.com/nf-core/modules/blob/master/modules/nf-core/trnascanse/main.nf https://github.com/EBI-Metagenomics/genomes-catalogue-pipeline/blob/master/containers/detect_rrnas/parse_tRNA.py rRNA: https://github.com/nf-core/modules/tree/master/modules/nf-core/barrnap