Merge pull request #2611 from EBISPOT/2313

Imported and created terms for CMPDKP #2313

Author: zoependlington

efo-base.owl

@@ -58,7 +58,7 @@
 Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the
 License. </dc:rights>
         <terms:license>www.apache.org/licenses/LICENSE-2.0</terms:license>
-        <rdfs:comment>2026-01-15</rdfs:comment>
+        <rdfs:comment>2026-01-19</rdfs:comment>
         <owl:versionInfo>3.86.0</owl:versionInfo>
     </owl:Ontology>
 

src/ontology/efo-edit.owl

@@ -419786,6 +419786,57 @@ Smart-seq3 is a continuation and improvement of the Smart-seq technology, specif
 
 
 
+    <!-- http://www.ebi.ac.uk/efo/EFO_0022982 -->
+
+    <owl:Class rdf:about="http://www.ebi.ac.uk/efo/EFO_0022982">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBA_2045275"/>
+        <obo:IAO_0000115>The maximum speed at which the blood flows through the aorta during the cardiac cycle, expressed as distance per unit of time.</obo:IAO_0000115>
+        <dc:creator>Zoe May Pendlington</dc:creator>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2026-01-19T15:25:27Z</dc:date>
+        <oboInOwl:hasDbXref>CMO:0001481</oboInOwl:hasDbXref>
+        <oboInOwl:hasExactSynonym>APV</oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>PAV</oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>aortic peak velocity</oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>maximum aortic velocity</oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>peak aortic blood flow velocity</oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>peak of aortic outflow velocity</oboInOwl:hasExactSynonym>
+        <rdfs:comment>OBA creation candidate</rdfs:comment>
+        <rdfs:label xml:lang="en">peak aortic velocity</rdfs:label>
+    </owl:Class>
+    <owl:Axiom>
+        <owl:annotatedSource rdf:resource="http://www.ebi.ac.uk/efo/EFO_0022982"/>
+        <owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
+        <owl:annotatedTarget>The maximum speed at which the blood flows through the aorta during the cardiac cycle, expressed as distance per unit of time.</owl:annotatedTarget>
+        <efo:definition_citation>PMID:38082205</efo:definition_citation>
+    </owl:Axiom>
+    
+
+
+    <!-- http://www.ebi.ac.uk/efo/EFO_0022983 -->
+
+    <owl:Class rdf:about="http://www.ebi.ac.uk/efo/EFO_0022983">
+        <rdfs:subClassOf rdf:resource="http://www.ebi.ac.uk/efo/EFO_0803347"/>
+        <obo:IAO_0000115>The determination of the number of nucleated red blood cells present in a sample.</obo:IAO_0000115>
+        <dc:creator>Zoe May Pendlington</dc:creator>
+        <dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2026-01-19T15:28:31Z</dc:date>
+        <oboInOwl:hasDbXref>NCIT:C74705</oboInOwl:hasDbXref>
+        <oboInOwl:hasExactSynonym>Nucleated Erythrocytes</oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>Nucleated RBC count</oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>Nucleated Red Blood Cell Count</oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>Nucleated Red Blood Cells</oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>Nucleated erythrocyte count</oboInOwl:hasExactSynonym>
+        <oboInOwl:hasExactSynonym>RBCNUC</oboInOwl:hasExactSynonym>
+        <rdfs:label xml:lang="en">nucleated red blood cell count</rdfs:label>
+    </owl:Class>
+    <owl:Axiom>
+        <owl:annotatedSource rdf:resource="http://www.ebi.ac.uk/efo/EFO_0022983"/>
+        <owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
+        <owl:annotatedTarget>The determination of the number of nucleated red blood cells present in a sample.</owl:annotatedTarget>
+        <efo:definition_citation>PMID:36959364</efo:definition_citation>
+    </owl:Axiom>
+    
+
+
     <!-- http://www.ebi.ac.uk/efo/EFO_0030000 -->
 
     <owl:Class rdf:about="http://www.ebi.ac.uk/efo/EFO_0030000">
@@ -680854,21 +680905,15 @@ Use: http://purl.obolibrary.org/obo/HP_0007773</efo:reason_for_obsolescence>
         <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </rdf:Description>
     <rdf:Description>
-        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000992</obo:IAO_0100001>
-        <efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
-        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000992</efo:reason_for_obsolescence>
-        <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
-    </rdf:Description>
-    <rdf:Description>
-        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000967</obo:IAO_0100001>
+        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000964</obo:IAO_0100001>
         <efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
-        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000967</efo:reason_for_obsolescence>
+        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000964</efo:reason_for_obsolescence>
         <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </rdf:Description>
     <rdf:Description>
-        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_VT0001547</obo:IAO_0100001>
+        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_2045321</obo:IAO_0100001>
         <efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
-        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:VT0001547</efo:reason_for_obsolescence>
+        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:2045321</efo:reason_for_obsolescence>
         <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </rdf:Description>
     <rdf:Description>
@@ -680878,21 +680923,21 @@ Use: http://purl.obolibrary.org/obo/HP_0007773</efo:reason_for_obsolescence>
         <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </rdf:Description>
     <rdf:Description>
-        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_2045321</obo:IAO_0100001>
+        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_VT0001547</obo:IAO_0100001>
         <efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
-        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:2045321</efo:reason_for_obsolescence>
+        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:VT0001547</efo:reason_for_obsolescence>
         <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </rdf:Description>
     <rdf:Description>
-        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000964</obo:IAO_0100001>
+        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1001001</obo:IAO_0100001>
         <efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
-        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000964</efo:reason_for_obsolescence>
+        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1001001</efo:reason_for_obsolescence>
         <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </rdf:Description>
     <rdf:Description>
-        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000992</obo:IAO_0100001>
+        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_VT0001547</obo:IAO_0100001>
         <efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
-        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000992</efo:reason_for_obsolescence>
+        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:VT0001547</efo:reason_for_obsolescence>
         <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </rdf:Description>
     <rdf:Description>
@@ -680902,21 +680947,21 @@ Use: http://purl.obolibrary.org/obo/HP_0007773</efo:reason_for_obsolescence>
         <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </rdf:Description>
     <rdf:Description>
-        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_VT0001547</obo:IAO_0100001>
+        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000992</obo:IAO_0100001>
         <efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
-        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:VT0001547</efo:reason_for_obsolescence>
+        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000992</efo:reason_for_obsolescence>
         <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </rdf:Description>
     <rdf:Description>
-        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1001001</obo:IAO_0100001>
+        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000967</obo:IAO_0100001>
         <efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
-        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1001001</efo:reason_for_obsolescence>
+        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000967</efo:reason_for_obsolescence>
         <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </rdf:Description>
     <rdf:Description>
-        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_VT0010499</obo:IAO_0100001>
+        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000992</obo:IAO_0100001>
         <efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
-        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:VT0010499</efo:reason_for_obsolescence>
+        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000992</efo:reason_for_obsolescence>
         <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </rdf:Description>
     <rdf:Description>
@@ -680925,6 +680970,12 @@ Use: http://purl.obolibrary.org/obo/HP_0007773</efo:reason_for_obsolescence>
         <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:2045376</efo:reason_for_obsolescence>
         <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
     </rdf:Description>
+    <rdf:Description>
+        <obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_VT0010499</obo:IAO_0100001>
+        <efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
+        <efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:VT0010499</efo:reason_for_obsolescence>
+        <owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
+    </rdf:Description>