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Merged
zoependlington merged 1 commit into from
Jan 13, 2026
Merged

Added sequencing term for #2137 #2604

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61 changes: 41 additions & 20 deletions src/ontology/efo-edit.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -419761,6 +419761,27 @@ Smart-seq3 is a continuation and improvement of the Smart-seq technology, specif



<!-- http://www.ebi.ac.uk/efo/EFO_0022980 -->

<owl:Class rdf:about="http://www.ebi.ac.uk/efo/EFO_0022980">
<rdfs:subClassOf rdf:resource="http://www.ebi.ac.uk/efo/EFO_0009922"/>
<obo:IAO_0000115>10X 3&apos; v3.1 is the first minor version of the third version of the 10x sequencing technology that sequences from the 3&apos; end of nucleic acid molecules.</obo:IAO_0000115>
<dc:creator>Zoe May Pendlington</dc:creator>
<dc:date rdf:datatype="http://www.w3.org/2001/XMLSchema#dateTime">2026-01-13T16:56:49Z</dc:date>
<oboInOwl:hasExactSynonym>10X v3.1</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>10X v3.1 sequencing</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>10x 3&apos; v3.1 sequencing</oboInOwl:hasExactSynonym>
<rdfs:label xml:lang="en">10x 3&apos; v3.1</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://www.ebi.ac.uk/efo/EFO_0022980"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget>10X 3&apos; v3.1 is the first minor version of the third version of the 10x sequencing technology that sequences from the 3&apos; end of nucleic acid molecules.</owl:annotatedTarget>
<efo:definition_citation>ORCID:0000-0003-1099-3328</efo:definition_citation>
</owl:Axiom>



<!-- http://www.ebi.ac.uk/efo/EFO_0030000 -->

<owl:Class rdf:about="http://www.ebi.ac.uk/efo/EFO_0030000">
Expand Down Expand Up @@ -680829,9 +680850,9 @@ Use: http://purl.obolibrary.org/obo/HP_0007773</efo:reason_for_obsolescence>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</rdf:Description>
<rdf:Description>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_VT0001547</obo:IAO_0100001>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_2045376</obo:IAO_0100001>
<efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:VT0001547</efo:reason_for_obsolescence>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:2045376</efo:reason_for_obsolescence>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</rdf:Description>
<rdf:Description>
Expand All @@ -680841,39 +680862,39 @@ Use: http://purl.obolibrary.org/obo/HP_0007773</efo:reason_for_obsolescence>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</rdf:Description>
<rdf:Description>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_2045376</obo:IAO_0100001>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_VT0001547</obo:IAO_0100001>
<efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:2045376</efo:reason_for_obsolescence>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:VT0001547</efo:reason_for_obsolescence>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</rdf:Description>
<rdf:Description>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1001001</obo:IAO_0100001>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_VT0001547</obo:IAO_0100001>
<efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1001001</efo:reason_for_obsolescence>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:VT0001547</efo:reason_for_obsolescence>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</rdf:Description>
<rdf:Description>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000992</obo:IAO_0100001>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000967</obo:IAO_0100001>
<efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000992</efo:reason_for_obsolescence>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000967</efo:reason_for_obsolescence>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</rdf:Description>
<rdf:Description>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000967</obo:IAO_0100001>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000992</obo:IAO_0100001>
<efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000967</efo:reason_for_obsolescence>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000992</efo:reason_for_obsolescence>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</rdf:Description>
<rdf:Description>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_VT0001547</obo:IAO_0100001>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1001001</obo:IAO_0100001>
<efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:VT0001547</efo:reason_for_obsolescence>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1001001</efo:reason_for_obsolescence>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</rdf:Description>
<rdf:Description>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_2045321</obo:IAO_0100001>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000992</obo:IAO_0100001>
<efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:2045321</efo:reason_for_obsolescence>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000992</efo:reason_for_obsolescence>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</rdf:Description>
<rdf:Description>
Expand All @@ -680883,21 +680904,21 @@ Use: http://purl.obolibrary.org/obo/HP_0007773</efo:reason_for_obsolescence>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</rdf:Description>
<rdf:Description>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000992</obo:IAO_0100001>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_2045321</obo:IAO_0100001>
<efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000992</efo:reason_for_obsolescence>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:2045321</efo:reason_for_obsolescence>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</rdf:Description>
<rdf:Description>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000964</obo:IAO_0100001>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_VT0010499</obo:IAO_0100001>
<efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000964</efo:reason_for_obsolescence>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:VT0010499</efo:reason_for_obsolescence>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</rdf:Description>
<rdf:Description>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_VT0010499</obo:IAO_0100001>
<obo:IAO_0100001>http://purl.obolibrary.org/obo/OBA_1000964</obo:IAO_0100001>
<efo:obsoleted_in_version>3.77.0</efo:obsoleted_in_version>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:VT0010499</efo:reason_for_obsolescence>
<efo:reason_for_obsolescence>Project to replace EFO measurement branch with enriched OBA branch. Please use: OBA:1000964</efo:reason_for_obsolescence>
<owl:deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</owl:deprecated>
</rdf:Description>

Expand Down