add mcps to tests

Author: jamesamcl

apitester4/src/main/java/uk/ac/ebi/ols/apitester/App.java

@@ -42,6 +42,14 @@ public static void main( String[] args ) throws MalformedURLException, IOExcepti
         optDeep.setRequired(false);
         options.addOption(optDeep);
 
+        Option optMcp = new Option(null, "mcp", false, "Test MCP (Model Context Protocol) functionality");
+        optMcp.setRequired(false);
+        options.addOption(optMcp);
+
+        Option optMcpOnly = new Option(null, "mcpOnly", false, "Only test MCP functionality (skip REST API tests)");
+        optMcpOnly.setRequired(false);
+        options.addOption(optMcpOnly);
+
         CommandLineParser parser = new DefaultParser();
         HelpFormatter formatter = new HelpFormatter();
         CommandLine cmd = null;
@@ -61,10 +69,12 @@ public static void main( String[] args ) throws MalformedURLException, IOExcepti
         String compareDir = cmd.getOptionValue("compareDir");
 	boolean deep = cmd.hasOption("deep");
 	String ontology = cmd.getOptionValue("ontology");
+	boolean mcp = cmd.hasOption("mcp");
+	boolean mcpOnly = cmd.hasOption("mcpOnly");
 
         boolean success = true;
 
-	if (url != null) {
+	if (url != null && !mcpOnly) {
 		if (!new Ols4ApiTester(url, outDir, deep, ontology).test()) {
 			System.out.println("Ols4ApiTester.test() reported failure");
 			success = false;
@@ -73,7 +83,18 @@ public static void main( String[] args ) throws MalformedURLException, IOExcepti
 		}
 	}
 
-	if(compareUrl != null) {
+	// Test MCP functionality if --mcp or --mcpOnly is specified
+	if (url != null && (mcp || mcpOnly)) {
+		System.out.println("Starting MCP tests...");
+		if (!new McpTester(url, outDir).test()) {
+			System.out.println("McpTester.test() reported failure");
+			success = false;
+		} else {
+			System.out.println("McpTester.test() reported success");
+		}
+	}
+
+	if(compareUrl != null && !mcpOnly) {
 		if(!new Ols4ApiTester(compareUrl, compareDir, deep, ontology).test()) {
 		System.out.println("Ols4ApiTester.test() reported failure for compareUrl");
 		success = false;
@@ -82,6 +103,17 @@ public static void main( String[] args ) throws MalformedURLException, IOExcepti
 		}
 	}
 
+	// Test MCP for compareUrl if requested
+	if(compareUrl != null && (mcp || mcpOnly)) {
+		System.out.println("Starting MCP tests for compareUrl...");
+		if (!new McpTester(compareUrl, compareDir).test()) {
+			System.out.println("McpTester.test() reported failure for compareUrl");
+			success = false;
+		} else {
+			System.out.println("McpTester.test() reported success for compareUrl");
+		}
+	}
+
         if(compareDir != null) {
             if(!new RecursiveJsonDiff(outDir, compareDir).diff()) {
 		System.out.println("RecursiveJsonDiff.diff() reported failure");