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lines changed Original file line number Diff line number Diff line change @@ -14,9 +14,12 @@ conda create -n encode-atac-seq-pipeline-macs2 --file ${SH_SCRIPT_DIR}/requireme
1414conda create -n encode-atac-seq-pipeline-spp --file ${SH_SCRIPT_DIR} /requirements.spp.txt \
1515 --override-channels -c r -c bioconda -c defaults -y
1616
17- # adhoc fix for https://github.com/ENCODE-DCC/chip-seq-pipeline2/issues/259
18- # force-install readline 6.2 from conda-forge (ignoring dependencies)
19- conda install -n encode-atac-seq-pipeline-spp --no-deps --no-update-deps -y readline==6.2 -c conda-forge
17+ # adhoc fix for the following issues:
18+ # - https://github.com/ENCODE-DCC/chip-seq-pipeline2/issues/259
19+ # - https://github.com/ENCODE-DCC/chip-seq-pipeline2/issues/265
20+ # force-install readline 6.2, ncurses 5.9 from conda-forge (ignoring dependencies)
21+ conda install -n encode-atac-seq-pipeline-spp --no-deps --no-update-deps -y \
22+ readline==6.2 ncurses==5.9 -c conda-forge
2023
2124conda create -n encode-atac-seq-pipeline-python2 --file ${SH_SCRIPT_DIR} /requirements.python2.txt \
2225 --override-channels -c conda-forge -c bioconda -c defaults -y
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