diff --git a/.github/workflows/run-tests.yml b/.github/workflows/run-tests.yml index 57ca396c..a0cb5f30 100644 --- a/.github/workflows/run-tests.yml +++ b/.github/workflows/run-tests.yml @@ -17,24 +17,19 @@ jobs: runs-on: ubuntu-latest strategy: matrix: - python-version: ["3.10"] + python-version: + - "3.10" env: PYTHON_VERSION: ${{ matrix.python-version }} steps: - - uses: actions/checkout@v4 + - uses: actions/checkout@v5 - - name: Set up Python ${{ matrix.python-version }} - uses: actions/setup-python@v5 + - name: Install uv and set the Python version + uses: astral-sh/setup-uv@v6 with: + version: "0.9.0" python-version: ${{ matrix.python-version }} - cache: "pip" - cache-dependency-path: "pyproject.toml" - - # Update full Python version - - name: Full Python version - run: | - echo "PYTHON_VERSION=$(python -c "import platform; print(platform.python_version())")" - echo "PYTHON_VERSION=$(python -c "import platform; print(platform.python_version())")" >> $GITHUB_ENV + enable-cache: "true" - name: Get changed files id: changed-files-specific @@ -60,32 +55,30 @@ jobs: ~/.cache/torch-uncertainty/ key: torch-uncertainty-${{ runner.os }} - - name: Install the minimal dependencies + - name: Install the project if: steps.changed-files-specific.outputs.only_changed != 'true' - run: | - python3 -m pip install torch torchvision - python3 -m pip install . - + run: uv sync --locked --dev --extra cpu + - name: Check that torch-uncertainty can be imported if: steps.changed-files-specific.outputs.only_changed != 'true' run: | - python3 -c "import torch_uncertainty; from torch_uncertainty.datamodules import MNISTDataModule" - - - name: Install the optional dependencies - if: steps.changed-files-specific.outputs.only_changed != 'true' - run: | - python3 -m pip install .[all] + uv run python -c "import torch_uncertainty; from torch_uncertainty.datamodules import MNISTDataModule" - name: Check style & format if: steps.changed-files-specific.outputs.only_changed != 'true' run: | - python3 -m ruff check torch_uncertainty --no-fix --statistics - python3 -m ruff format torch_uncertainty --check + uv run ruff check src/torch_uncertainty --no-fix --statistics + uv run ruff format src/torch_uncertainty --check - name: Test with pytest and compute coverage if: steps.changed-files-specific.outputs.only_changed != 'true' run: | - python3 -m pytest tests --cov --cov-report xml --cov-report term --durations 10 --junitxml=junit.xml + uv run --frozen pytest tests --cov --cov-report xml --cov-report term --durations 10 --junitxml=junit.xml + + # Store Python version + - name: Full Python version + run: | + echo "PYTHON_VERSION=$(uv run python -c "import platform; print(platform.python_version())")" >> $GITHUB_ENV - name: Upload coverage to Codecov if: steps.changed-files-specific.outputs.only_changed != 'true' && (github.event_name != 'pull_request' || github.base_ref == 'dev') diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 7aa85a6f..b454d3c3 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -24,6 +24,7 @@ repos: name: check-added-large-files entry: check-added-large-files language: system + exclude: uv.lock - id: ruff-check name: ruff-check entry: ruff check diff --git a/docs/Makefile b/docs/Makefile index 00a1e033..837017c5 100644 --- a/docs/Makefile +++ b/docs/Makefile @@ -10,10 +10,10 @@ BUILDDIR = build # Put it first so that "make" without argument is like "make help". help: - @$(SPHINXBUILD) -M help "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O) + @uv run $(SPHINXBUILD) -M help "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O) html-noplot: - @$(SPHINXBUILD) -D plot_gallery=0 -b html $(ALLSPHINXOPTS) $(SOURCEDIR) $(BUILDDIR)/html + @uv run $(SPHINXBUILD) -D plot_gallery=0 -b html $(ALLSPHINXOPTS) $(SOURCEDIR) $(BUILDDIR)/html @echo @echo "Build finished. The HTML pages are in $(BUILDDIR)/html." @@ -26,4 +26,4 @@ clean: # Catch-all target: route all unknown targets to Sphinx using the new # "make mode" option. $(O) is meant as a shortcut for $(SPHINXOPTS). %: Makefile - @$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O) + @uv run $(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O) diff --git a/docs/source/contributing.rst b/docs/source/contributing.rst index 11781df0..b4ebe6f5 100644 --- a/docs/source/contributing.rst +++ b/docs/source/contributing.rst @@ -34,23 +34,16 @@ If you are interested in contributing to torch_uncertainty, we first advise you to follow the following steps to reproduce a clean development environment ensuring continuous integration does not break. -1. Check that you have PyTorch already installed on your system +1. Install ``uv`` following the steps `here `_ 2. Clone the repository -3. Install torch-uncertainty in editable mode with the dev packages: - :cmd:`python3 -m pip install -e .[dev]` -4. Install pre-commit hooks with :cmd:`pre-commit install` +3. Install torch-uncertainty with the dev packages change ``gpu`` to ``cpu`` if needed: + :cmd:`uv sync --extra gpu` +4. Install pre-commit hooks with :cmd:`uv run pre-commit install` Build the documentation locally ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ -To build the documentation, reinstall TorchUncertainty with the packages of the docs -group: - -.. parsed-literal:: - - python3 -m pip install -e .[dev,docs] - -Then navigate to ``./docs`` and build the documentation with: +To build the documentation on Linux, navigate to ``./docs`` and build the documentation with: .. parsed-literal:: @@ -73,7 +66,7 @@ run, at the root of the folder: .. parsed-literal:: - python3 -m pytest tests + uv run pytest tests Try to include an emoji at the start of each commit message following the suggestions from `this page `_. diff --git a/pyproject.toml b/pyproject.toml index 696df0f5..c9de5877 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [build-system] -requires = ["flit_core >=3.2,<4"] -build-backend = "flit_core.buildapi" +requires = ["uv_build>=0.8.22,<0.9.0"] +build-backend = "uv_build" [project] name = "torch_uncertainty" @@ -34,23 +34,27 @@ classifiers = [ dependencies = [ "timm", "lightning[pytorch-extra]>=2.0", + "torch>=2.1,<=2.8.0", "torchvision>=0.16", "einops", "seaborn", ] -[project.optional-dependencies] -experiments = ["tensorboard", "huggingface-hub>=0.31", "safetensors"] -image = ["kornia", "h5py", "opencv-python", "torch-uncertainty-assets"] -tabular = ["pandas"] -distribution = ["scipy"] -timeseries = ["tslearn"] +[dependency-groups] dev = [ - "torch_uncertainty[experiments,image]", - "ruff==0.12.5", - "pytest-cov", - "pre-commit", - "pre-commit-hooks", + {include-group = "lint"}, + {include-group = "test"}, + {include-group = "docs"}, +] + +lint = [ + "ruff==0.12.5", + "pre-commit", + "pre-commit-hooks", +] +test = [ + "torch_uncertainty[all]", + "pytest-cov", ] docs = [ "sphinx==7.4.7", @@ -62,13 +66,59 @@ docs = [ "sphinx_design", "sphinxcontrib-sass", ] + + +[project.optional-dependencies] all = [ - "torch_uncertainty[dev,docs,tabular,distribution,timeseries]", - "scikit-learn", - "laplace-torch", - "glest==0.0.1a1", + "torch_uncertainty[experiments,image,distribution,timeseries,others]", +] +experiments = ["tensorboard", "huggingface-hub>=0.31", "safetensors"] +image = ["kornia", "h5py", "opencv-python", "torch-uncertainty-assets"] +distribution = ["scipy"] +timeseries = ["tslearn"] +others = [ + "scikit-learn", + "laplace-torch", + "glest==0.0.1a1", +] + +cpu = [ + "torch>=2.1.0,<=2.8.0", + "torchvision>=0.16.0", +] +gpu = [ + "torch>=2.1.0,<=2.8.0", + "torchvision>=0.16.0", +] + +[tool.uv] +conflicts = [ + [ + { extra = "cpu" }, + { extra = "gpu" }, + ], ] +[tool.uv.sources] +torch = [ + { index = "pytorch-cpu", extra = "cpu" }, + { index = "pytorch-cu128", extra = "gpu" }, +] +torchvision = [ + { index = "pytorch-cpu", extra = "cpu" }, + { index = "pytorch-cu128", extra = "gpu" }, +] + +[[tool.uv.index]] +name = "pytorch-cpu" +url = "https://download.pytorch.org/whl/cpu" +explicit = true + +[[tool.uv.index]] +name = "pytorch-cu128" +url = "https://download.pytorch.org/whl/cu128" +explicit = true + [project.urls] homepage = "https://torch-uncertainty.github.io/" documentation = "https://torch-uncertainty.github.io/quickstart.html" @@ -170,7 +220,12 @@ docstring-code-line-length = 80 [tool.coverage.run] branch = true include = ["*/torch-uncertainty/*"] -omit = ["*/tests/*", "*/datasets/*"] +omit = [ + "*/tests/*", + "*/datasets/*", + ".venv/*", + "*/venv/*", +] [tool.coverage.report] exclude_lines = [ diff --git a/torch_uncertainty/__init__.py b/src/torch_uncertainty/__init__.py similarity index 100% rename from torch_uncertainty/__init__.py rename to src/torch_uncertainty/__init__.py diff --git a/torch_uncertainty/callbacks/__init__.py b/src/torch_uncertainty/callbacks/__init__.py similarity index 100% rename from torch_uncertainty/callbacks/__init__.py rename to src/torch_uncertainty/callbacks/__init__.py diff --git a/torch_uncertainty/callbacks/checkpoint.py b/src/torch_uncertainty/callbacks/checkpoint.py similarity index 100% rename from torch_uncertainty/callbacks/checkpoint.py rename to src/torch_uncertainty/callbacks/checkpoint.py diff --git a/torch_uncertainty/callbacks/compound_checkpoint.py b/src/torch_uncertainty/callbacks/compound_checkpoint.py similarity index 100% rename from torch_uncertainty/callbacks/compound_checkpoint.py rename to src/torch_uncertainty/callbacks/compound_checkpoint.py diff --git a/torch_uncertainty/datamodules/__init__.py b/src/torch_uncertainty/datamodules/__init__.py similarity index 100% rename from torch_uncertainty/datamodules/__init__.py rename to src/torch_uncertainty/datamodules/__init__.py diff --git a/torch_uncertainty/datamodules/abstract.py b/src/torch_uncertainty/datamodules/abstract.py similarity index 100% rename from torch_uncertainty/datamodules/abstract.py rename to src/torch_uncertainty/datamodules/abstract.py diff --git a/torch_uncertainty/datamodules/classification/__init__.py b/src/torch_uncertainty/datamodules/classification/__init__.py similarity index 100% rename from torch_uncertainty/datamodules/classification/__init__.py rename to src/torch_uncertainty/datamodules/classification/__init__.py diff --git a/torch_uncertainty/datamodules/classification/cifar10.py b/src/torch_uncertainty/datamodules/classification/cifar10.py similarity index 100% rename from torch_uncertainty/datamodules/classification/cifar10.py rename to src/torch_uncertainty/datamodules/classification/cifar10.py diff --git a/torch_uncertainty/datamodules/classification/cifar100.py b/src/torch_uncertainty/datamodules/classification/cifar100.py similarity index 100% rename from torch_uncertainty/datamodules/classification/cifar100.py rename to src/torch_uncertainty/datamodules/classification/cifar100.py diff --git a/torch_uncertainty/datamodules/classification/imagenet.py b/src/torch_uncertainty/datamodules/classification/imagenet.py similarity index 100% rename from torch_uncertainty/datamodules/classification/imagenet.py rename to src/torch_uncertainty/datamodules/classification/imagenet.py diff --git a/torch_uncertainty/datamodules/classification/mnist.py b/src/torch_uncertainty/datamodules/classification/mnist.py similarity index 100% rename from torch_uncertainty/datamodules/classification/mnist.py rename to src/torch_uncertainty/datamodules/classification/mnist.py diff --git a/torch_uncertainty/datamodules/classification/tiny_imagenet.py b/src/torch_uncertainty/datamodules/classification/tiny_imagenet.py similarity index 100% rename from torch_uncertainty/datamodules/classification/tiny_imagenet.py rename to src/torch_uncertainty/datamodules/classification/tiny_imagenet.py diff --git a/torch_uncertainty/datamodules/classification/uci/__init__.py b/src/torch_uncertainty/datamodules/classification/uci/__init__.py similarity index 100% rename from torch_uncertainty/datamodules/classification/uci/__init__.py rename to src/torch_uncertainty/datamodules/classification/uci/__init__.py diff --git a/torch_uncertainty/datamodules/classification/uci/bank_marketing.py b/src/torch_uncertainty/datamodules/classification/uci/bank_marketing.py similarity index 100% rename from torch_uncertainty/datamodules/classification/uci/bank_marketing.py rename to src/torch_uncertainty/datamodules/classification/uci/bank_marketing.py diff --git a/torch_uncertainty/datamodules/classification/uci/dota2_games.py b/src/torch_uncertainty/datamodules/classification/uci/dota2_games.py similarity index 100% rename from torch_uncertainty/datamodules/classification/uci/dota2_games.py rename to src/torch_uncertainty/datamodules/classification/uci/dota2_games.py diff --git a/torch_uncertainty/datamodules/classification/uci/htru2.py b/src/torch_uncertainty/datamodules/classification/uci/htru2.py similarity index 100% rename from torch_uncertainty/datamodules/classification/uci/htru2.py rename to src/torch_uncertainty/datamodules/classification/uci/htru2.py diff --git a/torch_uncertainty/datamodules/classification/uci/online_shoppers.py b/src/torch_uncertainty/datamodules/classification/uci/online_shoppers.py similarity index 100% rename from torch_uncertainty/datamodules/classification/uci/online_shoppers.py rename to src/torch_uncertainty/datamodules/classification/uci/online_shoppers.py diff --git a/torch_uncertainty/datamodules/classification/uci/spam_base.py b/src/torch_uncertainty/datamodules/classification/uci/spam_base.py similarity index 100% rename from torch_uncertainty/datamodules/classification/uci/spam_base.py rename to src/torch_uncertainty/datamodules/classification/uci/spam_base.py diff --git a/torch_uncertainty/datamodules/classification/uci/uci_classification.py b/src/torch_uncertainty/datamodules/classification/uci/uci_classification.py similarity index 100% rename from torch_uncertainty/datamodules/classification/uci/uci_classification.py rename to src/torch_uncertainty/datamodules/classification/uci/uci_classification.py diff --git a/torch_uncertainty/datamodules/classification/ucr_uea.py b/src/torch_uncertainty/datamodules/classification/ucr_uea.py similarity index 100% rename from torch_uncertainty/datamodules/classification/ucr_uea.py rename to src/torch_uncertainty/datamodules/classification/ucr_uea.py diff --git a/torch_uncertainty/datamodules/depth/__init__.py b/src/torch_uncertainty/datamodules/depth/__init__.py similarity index 100% rename from torch_uncertainty/datamodules/depth/__init__.py rename to src/torch_uncertainty/datamodules/depth/__init__.py diff --git a/torch_uncertainty/datamodules/depth/base.py b/src/torch_uncertainty/datamodules/depth/base.py similarity index 100% rename from torch_uncertainty/datamodules/depth/base.py rename to src/torch_uncertainty/datamodules/depth/base.py diff --git a/torch_uncertainty/datamodules/depth/kitti.py b/src/torch_uncertainty/datamodules/depth/kitti.py similarity index 100% rename from torch_uncertainty/datamodules/depth/kitti.py rename to src/torch_uncertainty/datamodules/depth/kitti.py diff --git a/torch_uncertainty/datamodules/depth/muad.py b/src/torch_uncertainty/datamodules/depth/muad.py similarity index 100% rename from torch_uncertainty/datamodules/depth/muad.py rename to src/torch_uncertainty/datamodules/depth/muad.py diff --git a/torch_uncertainty/datamodules/depth/nyu.py b/src/torch_uncertainty/datamodules/depth/nyu.py similarity index 100% rename from torch_uncertainty/datamodules/depth/nyu.py rename to src/torch_uncertainty/datamodules/depth/nyu.py diff --git a/torch_uncertainty/datamodules/segmentation/__init__.py b/src/torch_uncertainty/datamodules/segmentation/__init__.py similarity index 100% rename from torch_uncertainty/datamodules/segmentation/__init__.py rename to src/torch_uncertainty/datamodules/segmentation/__init__.py diff --git a/torch_uncertainty/datamodules/segmentation/camvid.py b/src/torch_uncertainty/datamodules/segmentation/camvid.py similarity index 100% rename from torch_uncertainty/datamodules/segmentation/camvid.py rename to src/torch_uncertainty/datamodules/segmentation/camvid.py diff --git a/torch_uncertainty/datamodules/segmentation/cityscapes.py b/src/torch_uncertainty/datamodules/segmentation/cityscapes.py similarity index 100% rename from torch_uncertainty/datamodules/segmentation/cityscapes.py rename to src/torch_uncertainty/datamodules/segmentation/cityscapes.py diff --git a/torch_uncertainty/datamodules/segmentation/muad.py b/src/torch_uncertainty/datamodules/segmentation/muad.py similarity index 100% rename from torch_uncertainty/datamodules/segmentation/muad.py rename to src/torch_uncertainty/datamodules/segmentation/muad.py diff --git a/torch_uncertainty/datamodules/uci_regression.py b/src/torch_uncertainty/datamodules/uci_regression.py similarity index 100% rename from torch_uncertainty/datamodules/uci_regression.py rename to src/torch_uncertainty/datamodules/uci_regression.py diff --git a/torch_uncertainty/datasets/__init__.py b/src/torch_uncertainty/datasets/__init__.py similarity index 100% rename from torch_uncertainty/datasets/__init__.py rename to src/torch_uncertainty/datasets/__init__.py diff --git a/torch_uncertainty/datasets/aggregated_dataset.py b/src/torch_uncertainty/datasets/aggregated_dataset.py similarity index 100% rename from torch_uncertainty/datasets/aggregated_dataset.py rename to src/torch_uncertainty/datasets/aggregated_dataset.py diff --git a/torch_uncertainty/datasets/classification/__init__.py b/src/torch_uncertainty/datasets/classification/__init__.py similarity index 100% rename from torch_uncertainty/datasets/classification/__init__.py rename to src/torch_uncertainty/datasets/classification/__init__.py diff --git a/torch_uncertainty/datasets/classification/cifar/__init__.py b/src/torch_uncertainty/datasets/classification/cifar/__init__.py similarity index 100% rename from torch_uncertainty/datasets/classification/cifar/__init__.py rename to src/torch_uncertainty/datasets/classification/cifar/__init__.py diff --git a/torch_uncertainty/datasets/classification/cifar/cifar_c.py b/src/torch_uncertainty/datasets/classification/cifar/cifar_c.py similarity index 100% rename from torch_uncertainty/datasets/classification/cifar/cifar_c.py rename to src/torch_uncertainty/datasets/classification/cifar/cifar_c.py diff --git a/torch_uncertainty/datasets/classification/cifar/cifar_h.py b/src/torch_uncertainty/datasets/classification/cifar/cifar_h.py similarity index 100% rename from torch_uncertainty/datasets/classification/cifar/cifar_h.py rename to src/torch_uncertainty/datasets/classification/cifar/cifar_h.py diff --git a/torch_uncertainty/datasets/classification/cifar/cifar_n.py b/src/torch_uncertainty/datasets/classification/cifar/cifar_n.py similarity index 100% rename from torch_uncertainty/datasets/classification/cifar/cifar_n.py rename to src/torch_uncertainty/datasets/classification/cifar/cifar_n.py diff --git a/torch_uncertainty/datasets/classification/cub.py b/src/torch_uncertainty/datasets/classification/cub.py similarity index 100% rename from torch_uncertainty/datasets/classification/cub.py rename to src/torch_uncertainty/datasets/classification/cub.py diff --git a/torch_uncertainty/datasets/classification/imagenet/__init__.py b/src/torch_uncertainty/datasets/classification/imagenet/__init__.py similarity index 100% rename from torch_uncertainty/datasets/classification/imagenet/__init__.py rename to src/torch_uncertainty/datasets/classification/imagenet/__init__.py diff --git a/torch_uncertainty/datasets/classification/imagenet/base.py b/src/torch_uncertainty/datasets/classification/imagenet/base.py similarity index 100% rename from torch_uncertainty/datasets/classification/imagenet/base.py rename to src/torch_uncertainty/datasets/classification/imagenet/base.py diff --git a/torch_uncertainty/datasets/classification/imagenet/imagenet_a.py b/src/torch_uncertainty/datasets/classification/imagenet/imagenet_a.py similarity index 100% rename from torch_uncertainty/datasets/classification/imagenet/imagenet_a.py rename to src/torch_uncertainty/datasets/classification/imagenet/imagenet_a.py diff --git a/torch_uncertainty/datasets/classification/imagenet/imagenet_c.py b/src/torch_uncertainty/datasets/classification/imagenet/imagenet_c.py similarity index 100% rename from torch_uncertainty/datasets/classification/imagenet/imagenet_c.py rename to src/torch_uncertainty/datasets/classification/imagenet/imagenet_c.py diff --git a/torch_uncertainty/datasets/classification/imagenet/imagenet_o.py b/src/torch_uncertainty/datasets/classification/imagenet/imagenet_o.py similarity index 100% rename from torch_uncertainty/datasets/classification/imagenet/imagenet_o.py rename to src/torch_uncertainty/datasets/classification/imagenet/imagenet_o.py diff --git a/torch_uncertainty/datasets/classification/imagenet/imagenet_r.py b/src/torch_uncertainty/datasets/classification/imagenet/imagenet_r.py similarity index 100% rename from torch_uncertainty/datasets/classification/imagenet/imagenet_r.py rename to src/torch_uncertainty/datasets/classification/imagenet/imagenet_r.py diff --git a/torch_uncertainty/datasets/classification/imagenet/tiny_imagenet.py b/src/torch_uncertainty/datasets/classification/imagenet/tiny_imagenet.py similarity index 100% rename from torch_uncertainty/datasets/classification/imagenet/tiny_imagenet.py rename to src/torch_uncertainty/datasets/classification/imagenet/tiny_imagenet.py diff --git a/torch_uncertainty/datasets/classification/imagenet/tiny_imagenet_c.py b/src/torch_uncertainty/datasets/classification/imagenet/tiny_imagenet_c.py similarity index 100% rename from torch_uncertainty/datasets/classification/imagenet/tiny_imagenet_c.py rename to src/torch_uncertainty/datasets/classification/imagenet/tiny_imagenet_c.py diff --git a/torch_uncertainty/datasets/classification/mnist_c.py b/src/torch_uncertainty/datasets/classification/mnist_c.py similarity index 100% rename from torch_uncertainty/datasets/classification/mnist_c.py rename to src/torch_uncertainty/datasets/classification/mnist_c.py diff --git a/torch_uncertainty/datasets/classification/not_mnist.py b/src/torch_uncertainty/datasets/classification/not_mnist.py similarity index 100% rename from torch_uncertainty/datasets/classification/not_mnist.py rename to src/torch_uncertainty/datasets/classification/not_mnist.py diff --git a/torch_uncertainty/datasets/classification/openimage_o.py b/src/torch_uncertainty/datasets/classification/openimage_o.py similarity index 100% rename from torch_uncertainty/datasets/classification/openimage_o.py rename to src/torch_uncertainty/datasets/classification/openimage_o.py diff --git a/torch_uncertainty/datasets/classification/uci/__init__.py b/src/torch_uncertainty/datasets/classification/uci/__init__.py similarity index 100% rename from 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b/src/torch_uncertainty/models/classification/vgg/base.py similarity index 100% rename from torch_uncertainty/models/classification/vgg/base.py rename to src/torch_uncertainty/models/classification/vgg/base.py diff --git a/torch_uncertainty/models/classification/vgg/configs.py b/src/torch_uncertainty/models/classification/vgg/configs.py similarity index 100% rename from torch_uncertainty/models/classification/vgg/configs.py rename to src/torch_uncertainty/models/classification/vgg/configs.py diff --git a/torch_uncertainty/models/classification/vgg/packed.py b/src/torch_uncertainty/models/classification/vgg/packed.py similarity index 100% rename from torch_uncertainty/models/classification/vgg/packed.py rename to src/torch_uncertainty/models/classification/vgg/packed.py diff --git a/torch_uncertainty/models/classification/vgg/std.py b/src/torch_uncertainty/models/classification/vgg/std.py similarity index 100% rename from torch_uncertainty/models/classification/vgg/std.py rename to src/torch_uncertainty/models/classification/vgg/std.py diff --git a/torch_uncertainty/models/classification/wideresnet/__init__.py b/src/torch_uncertainty/models/classification/wideresnet/__init__.py similarity index 100% rename from torch_uncertainty/models/classification/wideresnet/__init__.py rename to src/torch_uncertainty/models/classification/wideresnet/__init__.py diff --git a/torch_uncertainty/models/classification/wideresnet/batched.py b/src/torch_uncertainty/models/classification/wideresnet/batched.py similarity index 100% rename from torch_uncertainty/models/classification/wideresnet/batched.py rename to src/torch_uncertainty/models/classification/wideresnet/batched.py diff --git a/torch_uncertainty/models/classification/wideresnet/masked.py b/src/torch_uncertainty/models/classification/wideresnet/masked.py similarity index 100% rename from torch_uncertainty/models/classification/wideresnet/masked.py rename to src/torch_uncertainty/models/classification/wideresnet/masked.py diff --git a/torch_uncertainty/models/classification/wideresnet/mimo.py b/src/torch_uncertainty/models/classification/wideresnet/mimo.py similarity index 100% rename from torch_uncertainty/models/classification/wideresnet/mimo.py rename to src/torch_uncertainty/models/classification/wideresnet/mimo.py diff --git a/torch_uncertainty/models/classification/wideresnet/packed.py b/src/torch_uncertainty/models/classification/wideresnet/packed.py similarity index 100% rename from torch_uncertainty/models/classification/wideresnet/packed.py rename to src/torch_uncertainty/models/classification/wideresnet/packed.py diff --git a/torch_uncertainty/models/classification/wideresnet/std.py b/src/torch_uncertainty/models/classification/wideresnet/std.py similarity index 100% rename from torch_uncertainty/models/classification/wideresnet/std.py rename to src/torch_uncertainty/models/classification/wideresnet/std.py diff --git a/torch_uncertainty/models/depth/__init__.py b/src/torch_uncertainty/models/depth/__init__.py similarity index 100% rename from torch_uncertainty/models/depth/__init__.py rename to src/torch_uncertainty/models/depth/__init__.py diff --git a/torch_uncertainty/models/depth/bts.py b/src/torch_uncertainty/models/depth/bts.py similarity index 100% rename from torch_uncertainty/models/depth/bts.py rename to src/torch_uncertainty/models/depth/bts.py diff --git a/torch_uncertainty/models/mlp.py b/src/torch_uncertainty/models/mlp.py similarity index 100% rename from torch_uncertainty/models/mlp.py rename to src/torch_uncertainty/models/mlp.py diff --git a/torch_uncertainty/models/segmentation/__init__.py b/src/torch_uncertainty/models/segmentation/__init__.py similarity index 100% rename from torch_uncertainty/models/segmentation/__init__.py rename to src/torch_uncertainty/models/segmentation/__init__.py diff --git a/torch_uncertainty/models/segmentation/deeplab.py b/src/torch_uncertainty/models/segmentation/deeplab.py similarity index 100% rename from torch_uncertainty/models/segmentation/deeplab.py rename to src/torch_uncertainty/models/segmentation/deeplab.py diff --git a/torch_uncertainty/models/segmentation/segformer.py b/src/torch_uncertainty/models/segmentation/segformer.py similarity index 100% rename from torch_uncertainty/models/segmentation/segformer.py rename to src/torch_uncertainty/models/segmentation/segformer.py diff --git a/torch_uncertainty/models/segmentation/unet/__init__.py b/src/torch_uncertainty/models/segmentation/unet/__init__.py similarity index 100% rename from torch_uncertainty/models/segmentation/unet/__init__.py rename to src/torch_uncertainty/models/segmentation/unet/__init__.py diff --git a/torch_uncertainty/models/segmentation/unet/batched.py b/src/torch_uncertainty/models/segmentation/unet/batched.py similarity index 100% rename from torch_uncertainty/models/segmentation/unet/batched.py rename to src/torch_uncertainty/models/segmentation/unet/batched.py diff --git a/torch_uncertainty/models/segmentation/unet/masked.py b/src/torch_uncertainty/models/segmentation/unet/masked.py similarity index 100% rename from torch_uncertainty/models/segmentation/unet/masked.py rename to src/torch_uncertainty/models/segmentation/unet/masked.py diff --git a/torch_uncertainty/models/segmentation/unet/mimo.py b/src/torch_uncertainty/models/segmentation/unet/mimo.py similarity index 100% rename from torch_uncertainty/models/segmentation/unet/mimo.py rename to src/torch_uncertainty/models/segmentation/unet/mimo.py diff --git a/torch_uncertainty/models/segmentation/unet/packed.py b/src/torch_uncertainty/models/segmentation/unet/packed.py similarity index 100% rename from torch_uncertainty/models/segmentation/unet/packed.py rename to src/torch_uncertainty/models/segmentation/unet/packed.py diff --git a/torch_uncertainty/models/segmentation/unet/standard.py b/src/torch_uncertainty/models/segmentation/unet/standard.py similarity index 100% rename from torch_uncertainty/models/segmentation/unet/standard.py rename to src/torch_uncertainty/models/segmentation/unet/standard.py diff --git a/torch_uncertainty/models/utils.py b/src/torch_uncertainty/models/utils.py similarity index 100% rename from torch_uncertainty/models/utils.py rename to src/torch_uncertainty/models/utils.py diff --git a/torch_uncertainty/models/wrappers/__init__.py b/src/torch_uncertainty/models/wrappers/__init__.py similarity index 100% rename from torch_uncertainty/models/wrappers/__init__.py rename to src/torch_uncertainty/models/wrappers/__init__.py diff --git a/torch_uncertainty/models/wrappers/batch_ensemble.py b/src/torch_uncertainty/models/wrappers/batch_ensemble.py similarity index 100% rename from torch_uncertainty/models/wrappers/batch_ensemble.py rename to src/torch_uncertainty/models/wrappers/batch_ensemble.py diff --git a/torch_uncertainty/models/wrappers/checkpoint_collector.py b/src/torch_uncertainty/models/wrappers/checkpoint_collector.py similarity index 100% rename from torch_uncertainty/models/wrappers/checkpoint_collector.py rename to src/torch_uncertainty/models/wrappers/checkpoint_collector.py diff --git a/torch_uncertainty/models/wrappers/deep_ensembles.py b/src/torch_uncertainty/models/wrappers/deep_ensembles.py similarity index 100% rename from torch_uncertainty/models/wrappers/deep_ensembles.py rename to src/torch_uncertainty/models/wrappers/deep_ensembles.py diff --git a/torch_uncertainty/models/wrappers/ema.py b/src/torch_uncertainty/models/wrappers/ema.py similarity index 100% rename from torch_uncertainty/models/wrappers/ema.py rename to src/torch_uncertainty/models/wrappers/ema.py diff --git a/torch_uncertainty/models/wrappers/mc_dropout.py b/src/torch_uncertainty/models/wrappers/mc_dropout.py similarity index 100% rename from torch_uncertainty/models/wrappers/mc_dropout.py rename to src/torch_uncertainty/models/wrappers/mc_dropout.py diff --git a/torch_uncertainty/models/wrappers/stochastic.py b/src/torch_uncertainty/models/wrappers/stochastic.py similarity index 100% rename from torch_uncertainty/models/wrappers/stochastic.py rename to src/torch_uncertainty/models/wrappers/stochastic.py diff --git a/torch_uncertainty/models/wrappers/swa.py b/src/torch_uncertainty/models/wrappers/swa.py similarity index 100% rename from torch_uncertainty/models/wrappers/swa.py rename to src/torch_uncertainty/models/wrappers/swa.py diff --git a/torch_uncertainty/models/wrappers/swag.py b/src/torch_uncertainty/models/wrappers/swag.py similarity index 100% rename from torch_uncertainty/models/wrappers/swag.py rename to src/torch_uncertainty/models/wrappers/swag.py diff --git a/torch_uncertainty/models/wrappers/zero.py b/src/torch_uncertainty/models/wrappers/zero.py similarity index 100% rename from torch_uncertainty/models/wrappers/zero.py rename to src/torch_uncertainty/models/wrappers/zero.py diff --git a/torch_uncertainty/ood_criteria.py b/src/torch_uncertainty/ood_criteria.py similarity index 100% rename from torch_uncertainty/ood_criteria.py rename to src/torch_uncertainty/ood_criteria.py diff --git a/torch_uncertainty/optim/__init__.py b/src/torch_uncertainty/optim/__init__.py similarity index 100% rename from torch_uncertainty/optim/__init__.py rename to src/torch_uncertainty/optim/__init__.py diff --git a/torch_uncertainty/optim/sghmc.py b/src/torch_uncertainty/optim/sghmc.py similarity index 100% rename from torch_uncertainty/optim/sghmc.py rename to src/torch_uncertainty/optim/sghmc.py diff --git a/torch_uncertainty/optim/sgld.py b/src/torch_uncertainty/optim/sgld.py similarity index 100% rename from torch_uncertainty/optim/sgld.py rename to src/torch_uncertainty/optim/sgld.py diff --git a/torch_uncertainty/optim_recipes.py b/src/torch_uncertainty/optim_recipes.py similarity index 100% rename from torch_uncertainty/optim_recipes.py rename to src/torch_uncertainty/optim_recipes.py diff --git a/torch_uncertainty/post_processing/__init__.py b/src/torch_uncertainty/post_processing/__init__.py similarity index 100% rename from torch_uncertainty/post_processing/__init__.py rename to src/torch_uncertainty/post_processing/__init__.py diff --git a/torch_uncertainty/post_processing/abnn.py b/src/torch_uncertainty/post_processing/abnn.py similarity index 100% rename from torch_uncertainty/post_processing/abnn.py rename to src/torch_uncertainty/post_processing/abnn.py diff --git a/torch_uncertainty/post_processing/abstract.py b/src/torch_uncertainty/post_processing/abstract.py similarity index 100% rename from torch_uncertainty/post_processing/abstract.py rename to src/torch_uncertainty/post_processing/abstract.py diff --git a/torch_uncertainty/post_processing/calibration/__init__.py b/src/torch_uncertainty/post_processing/calibration/__init__.py similarity index 100% rename from torch_uncertainty/post_processing/calibration/__init__.py rename to src/torch_uncertainty/post_processing/calibration/__init__.py diff --git a/torch_uncertainty/post_processing/calibration/matrix_scaler.py b/src/torch_uncertainty/post_processing/calibration/matrix_scaler.py similarity index 100% rename from torch_uncertainty/post_processing/calibration/matrix_scaler.py rename to src/torch_uncertainty/post_processing/calibration/matrix_scaler.py diff --git a/torch_uncertainty/post_processing/calibration/scaler.py b/src/torch_uncertainty/post_processing/calibration/scaler.py similarity index 100% rename from torch_uncertainty/post_processing/calibration/scaler.py rename to src/torch_uncertainty/post_processing/calibration/scaler.py diff --git a/torch_uncertainty/post_processing/calibration/temperature_scaler.py b/src/torch_uncertainty/post_processing/calibration/temperature_scaler.py similarity index 100% rename from torch_uncertainty/post_processing/calibration/temperature_scaler.py rename to src/torch_uncertainty/post_processing/calibration/temperature_scaler.py diff --git a/torch_uncertainty/post_processing/calibration/vector_scaler.py b/src/torch_uncertainty/post_processing/calibration/vector_scaler.py similarity index 100% rename from torch_uncertainty/post_processing/calibration/vector_scaler.py rename to src/torch_uncertainty/post_processing/calibration/vector_scaler.py diff --git a/torch_uncertainty/post_processing/conformal/__init__.py b/src/torch_uncertainty/post_processing/conformal/__init__.py similarity index 100% rename from torch_uncertainty/post_processing/conformal/__init__.py rename to src/torch_uncertainty/post_processing/conformal/__init__.py diff --git a/torch_uncertainty/post_processing/conformal/abstract.py b/src/torch_uncertainty/post_processing/conformal/abstract.py similarity index 100% rename from torch_uncertainty/post_processing/conformal/abstract.py rename to src/torch_uncertainty/post_processing/conformal/abstract.py diff --git a/torch_uncertainty/post_processing/conformal/aps.py b/src/torch_uncertainty/post_processing/conformal/aps.py similarity index 100% rename from torch_uncertainty/post_processing/conformal/aps.py rename to src/torch_uncertainty/post_processing/conformal/aps.py diff --git a/torch_uncertainty/post_processing/conformal/raps.py b/src/torch_uncertainty/post_processing/conformal/raps.py similarity index 100% rename from torch_uncertainty/post_processing/conformal/raps.py rename to src/torch_uncertainty/post_processing/conformal/raps.py diff --git a/torch_uncertainty/post_processing/conformal/thr.py b/src/torch_uncertainty/post_processing/conformal/thr.py similarity index 100% rename from torch_uncertainty/post_processing/conformal/thr.py rename to src/torch_uncertainty/post_processing/conformal/thr.py diff --git a/torch_uncertainty/post_processing/laplace.py b/src/torch_uncertainty/post_processing/laplace.py similarity index 100% rename from torch_uncertainty/post_processing/laplace.py rename to src/torch_uncertainty/post_processing/laplace.py diff --git a/torch_uncertainty/post_processing/mc_batch_norm.py b/src/torch_uncertainty/post_processing/mc_batch_norm.py similarity index 100% rename from torch_uncertainty/post_processing/mc_batch_norm.py rename to src/torch_uncertainty/post_processing/mc_batch_norm.py diff --git a/torch_uncertainty/routines/__init__.py b/src/torch_uncertainty/routines/__init__.py similarity index 100% rename from torch_uncertainty/routines/__init__.py rename to src/torch_uncertainty/routines/__init__.py diff --git a/torch_uncertainty/routines/classification.py b/src/torch_uncertainty/routines/classification.py similarity index 100% rename from torch_uncertainty/routines/classification.py rename to src/torch_uncertainty/routines/classification.py diff --git a/torch_uncertainty/routines/pixel_regression.py b/src/torch_uncertainty/routines/pixel_regression.py similarity index 100% rename from torch_uncertainty/routines/pixel_regression.py rename to src/torch_uncertainty/routines/pixel_regression.py diff --git a/torch_uncertainty/routines/regression.py b/src/torch_uncertainty/routines/regression.py similarity index 100% rename from torch_uncertainty/routines/regression.py rename to src/torch_uncertainty/routines/regression.py diff --git a/torch_uncertainty/routines/segmentation.py b/src/torch_uncertainty/routines/segmentation.py similarity index 100% rename from torch_uncertainty/routines/segmentation.py rename to src/torch_uncertainty/routines/segmentation.py diff --git a/torch_uncertainty/transforms/__init__.py b/src/torch_uncertainty/transforms/__init__.py similarity index 100% rename from torch_uncertainty/transforms/__init__.py rename to src/torch_uncertainty/transforms/__init__.py diff --git a/torch_uncertainty/transforms/batch.py b/src/torch_uncertainty/transforms/batch.py similarity index 100% rename from torch_uncertainty/transforms/batch.py rename to src/torch_uncertainty/transforms/batch.py diff --git a/torch_uncertainty/transforms/corruption.py b/src/torch_uncertainty/transforms/corruption.py similarity index 100% rename from torch_uncertainty/transforms/corruption.py rename to src/torch_uncertainty/transforms/corruption.py diff --git a/torch_uncertainty/transforms/cutout.py b/src/torch_uncertainty/transforms/cutout.py similarity index 100% rename from torch_uncertainty/transforms/cutout.py rename to src/torch_uncertainty/transforms/cutout.py diff --git a/torch_uncertainty/transforms/image.py b/src/torch_uncertainty/transforms/image.py similarity index 100% rename from torch_uncertainty/transforms/image.py rename to src/torch_uncertainty/transforms/image.py diff --git a/torch_uncertainty/transforms/mixup.py b/src/torch_uncertainty/transforms/mixup.py similarity index 100% rename from torch_uncertainty/transforms/mixup.py rename to src/torch_uncertainty/transforms/mixup.py diff --git a/torch_uncertainty/transforms/pixmix.py b/src/torch_uncertainty/transforms/pixmix.py similarity index 100% rename from torch_uncertainty/transforms/pixmix.py rename to src/torch_uncertainty/transforms/pixmix.py diff --git a/torch_uncertainty/utils/__init__.py b/src/torch_uncertainty/utils/__init__.py similarity index 100% rename from torch_uncertainty/utils/__init__.py rename to src/torch_uncertainty/utils/__init__.py diff --git a/torch_uncertainty/utils/checkpoints.py b/src/torch_uncertainty/utils/checkpoints.py similarity index 100% rename from torch_uncertainty/utils/checkpoints.py rename to src/torch_uncertainty/utils/checkpoints.py diff --git a/torch_uncertainty/utils/cli.py b/src/torch_uncertainty/utils/cli.py similarity index 100% rename from torch_uncertainty/utils/cli.py rename to src/torch_uncertainty/utils/cli.py diff --git a/torch_uncertainty/utils/distributions.py b/src/torch_uncertainty/utils/distributions.py similarity index 100% rename from torch_uncertainty/utils/distributions.py rename to src/torch_uncertainty/utils/distributions.py diff --git a/torch_uncertainty/utils/evaluation_loop.py b/src/torch_uncertainty/utils/evaluation_loop.py similarity index 100% rename from torch_uncertainty/utils/evaluation_loop.py rename to src/torch_uncertainty/utils/evaluation_loop.py diff --git a/torch_uncertainty/utils/hub.py b/src/torch_uncertainty/utils/hub.py similarity index 100% rename from torch_uncertainty/utils/hub.py rename to src/torch_uncertainty/utils/hub.py diff --git a/torch_uncertainty/utils/misc.py b/src/torch_uncertainty/utils/misc.py similarity index 100% rename from torch_uncertainty/utils/misc.py rename to src/torch_uncertainty/utils/misc.py diff --git a/torch_uncertainty/utils/plotting.py b/src/torch_uncertainty/utils/plotting.py similarity index 100% rename from torch_uncertainty/utils/plotting.py rename to src/torch_uncertainty/utils/plotting.py diff --git a/torch_uncertainty/utils/trainer.py b/src/torch_uncertainty/utils/trainer.py similarity index 100% rename from torch_uncertainty/utils/trainer.py rename to src/torch_uncertainty/utils/trainer.py diff --git a/torch_uncertainty/utils/transforms.py b/src/torch_uncertainty/utils/transforms.py similarity index 100% rename from torch_uncertainty/utils/transforms.py rename to src/torch_uncertainty/utils/transforms.py diff --git a/tests/test_cli.py b/tests/test_cli.py index 6061c749..cb9460ed 100644 --- a/tests/test_cli.py +++ b/tests/test_cli.py @@ -1,8 +1,7 @@ import sys -from torch_uncertainty.models import resnet -from torch_uncertainty.routines import ClassificationRoutine from torch_uncertainty.datamodules import CIFAR10DataModule +from torch_uncertainty.routines import ClassificationRoutine from torch_uncertainty.utils.cli import TULightningCLI, TUSaveConfigCallback diff --git a/uv.lock b/uv.lock new file mode 100644 index 00000000..0b2217fe --- /dev/null +++ b/uv.lock @@ -0,0 +1,4067 @@ +version = 1 +revision = 3 +requires-python = ">=3.10" +resolution-markers = [ + "python_full_version >= '3.12' and extra != 'extra-17-torch-uncertainty-cpu' and extra == 'extra-17-torch-uncertainty-gpu'", + "python_full_version == '3.11.*' and extra != 'extra-17-torch-uncertainty-cpu' and extra == 'extra-17-torch-uncertainty-gpu'", + "python_full_version < '3.11' and extra != 'extra-17-torch-uncertainty-cpu' and extra == 'extra-17-torch-uncertainty-gpu'", + "(python_full_version >= '3.14' and platform_machine == 'aarch64' and platform_python_implementation == 'CPython' and sys_platform == 'linux' and extra == 'extra-17-torch-uncertainty-cpu' and extra != 'extra-17-torch-uncertainty-gpu') or (python_full_version >= '3.12' and platform_machine != 'aarch64' and sys_platform == 'linux' and extra == 'extra-17-torch-uncertainty-cpu' and extra != 'extra-17-torch-uncertainty-gpu') or (python_full_version >= '3.12' and platform_python_implementation != 'CPython' and sys_platform == 'linux' and extra == 'extra-17-torch-uncertainty-cpu' and extra != 'extra-17-torch-uncertainty-gpu') or (python_full_version >= '3.12' and sys_platform != 'darwin' and sys_platform != 'linux' and extra == 'extra-17-torch-uncertainty-cpu' and extra != 'extra-17-torch-uncertainty-gpu')", + "python_full_version >= '3.12' and python_full_version < '3.14' and platform_machine == 'aarch64' and platform_python_implementation == 'CPython' and sys_platform == 'linux' and extra == 'extra-17-torch-uncertainty-cpu' and extra != 'extra-17-torch-uncertainty-gpu'", + "(python_full_version == '3.11.*' and platform_machine != 'aarch64' and sys_platform == 'linux' and extra == 'extra-17-torch-uncertainty-cpu' and extra != 'extra-17-torch-uncertainty-gpu') or (python_full_version == '3.11.*' and platform_python_implementation != 'CPython' and sys_platform == 'linux' and extra == 'extra-17-torch-uncertainty-cpu' and extra != 'extra-17-torch-uncertainty-gpu') or (python_full_version == '3.11.*' and sys_platform != 'darwin' and sys_platform != 'linux' and extra == 'extra-17-torch-uncertainty-cpu' and extra != 'extra-17-torch-uncertainty-gpu')", + "(python_full_version < '3.11' and platform_machine != 'aarch64' and sys_platform == 'linux' and extra == 'extra-17-torch-uncertainty-cpu' and extra != 'extra-17-torch-uncertainty-gpu') or (python_full_version < '3.11' and platform_python_implementation != 'CPython' and sys_platform == 'linux' and extra == 'extra-17-torch-uncertainty-cpu' and extra != 'extra-17-torch-uncertainty-gpu') or (python_full_version < '3.11' and sys_platform != 'darwin' and sys_platform != 'linux' and extra == 'extra-17-torch-uncertainty-cpu' and extra != 'extra-17-torch-uncertainty-gpu')", + "python_full_version == '3.11.*' and platform_machine == 'aarch64' and platform_python_implementation == 'CPython' and sys_platform == 'linux' and extra == 'extra-17-torch-uncertainty-cpu' and extra != 'extra-17-torch-uncertainty-gpu'", + "python_full_version < '3.11' and platform_machine == 'aarch64' and platform_python_implementation == 'CPython' and sys_platform == 'linux' and 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