Automate publishing to PyPI

Author: veghp

.github/workflows/publish.yml

@@ -0,0 +1,46 @@
+name: Publish to PyPI
+
+on:
+  release:
+    types: [created]
+
+jobs:
+  test:
+    runs-on: ubuntu-24.04
+
+    steps:
+      - uses: actions/checkout@v4
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.12"
+      - name: Install
+        run: |
+          pip install pytest
+          sudo apt-get -qq update
+          sudo apt-get install ncbi-blast+
+          pip install -e .
+      - name: Test
+        run: |
+          python -m pytest
+  deploy:
+    runs-on: ubuntu-24.04
+    needs: [test]
+    permissions:
+      id-token: write
+    steps:
+    - uses: actions/checkout@v4
+    - name: Set up Python
+      uses: actions/setup-python@v5
+      with:
+        python-version: '3.12'
+        cache: pip
+        cache-dependency-path: '**/pyproject.toml'
+    - name: Install dependencies
+      run: |
+        pip install setuptools wheel build
+    - name: Build
+      run: |
+        python -m build
+    - name: Publish
+      uses: pypa/gh-action-pypi-publish@release/v1