Ubuntu system make reports an error #1426
Description
Describe the bug
I created an Ubuntu image using Docker and installed the software according to the README in Docker. During the compilation process, I solved the problem by following # 1416. However, I encountered the error shared_ptr and added "# include using std::shared_ptr" in projectdatabase. h ; Later, an error was reported stating 'main. cpp: 30:10: fatal error: phantomstyle. h: No such file or directory'.
To Reproduce
Do you wish to install this program in release mode? y
Info: creating stash file /elmaven/ElMaven/.qmake.stash
cd 3rdparty/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/3rdparty/3rdparty.pro CONFIG+=release ) && make -f Makefile
make[1]: Entering directory '/elmaven/ElMaven/3rdparty'
cd obiwarp/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/3rdparty/obiwarp/obiwarp.pro CONFIG+=release ) && make -f Makefile
Project MESSAGE: using unix config
Project MESSAGE: /usr/local/include/ /elmaven/ElMaven/3rdparty/obiwarp
make[2]: Entering directory '/elmaven/ElMaven/3rdparty/obiwarp'
compiling obiwarp.cpp
compiling dynprog.cpp
compiling mat.cpp
compiling vec.cpp
rm -f /elmaven/build/libs/libobiwarp.a
ar cqs /elmaven/build/libs/libobiwarp.a /elmaven/build/tmp/obiwarp/obiwarp.o /elmaven/build/tmp/obiwarp/dynprog.o /elmaven/build/tmp/obiwarp/mat.o /elmaven/build/tmp/obiwarp/vec.o
make[2]: Leaving directory '/elmaven/ElMaven/3rdparty/obiwarp'
cd libneural/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/3rdparty/libneural/libneural.pro CONFIG+=release ) && make -f Makefile
Project MESSAGE: using unix config
make[2]: Entering directory '/elmaven/ElMaven/3rdparty/libneural'
compiling neuron.cc
compiling nnwork.cc
rm -f /elmaven/build/libs/libneural.a
ar cqs /elmaven/build/libs/libneural.a /elmaven/build/tmp/neural/neuron.o /elmaven/build/tmp/neural/nnwork.o
make[2]: Leaving directory '/elmaven/ElMaven/3rdparty/libneural'
cd libcdfread/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/3rdparty/libcdfread/libcdfread.pro CONFIG+=release ) && make -f Makefile
Project MESSAGE: using unix config
make[2]: Entering directory '/elmaven/ElMaven/3rdparty/libcdfread'
compiling ms10aux.c
compiling ms10enum.c
compiling ms10io.c
rm -f /elmaven/build/libs/libcdfread.a
ar cqs /elmaven/build/libs/libcdfread.a /elmaven/build/tmp/cdfread/ms10aux.o /elmaven/build/tmp/cdfread/ms10enum.o /elmaven/build/tmp/cdfread/ms10io.o
make[2]: Leaving directory '/elmaven/ElMaven/3rdparty/libcdfread'
cd libcsvparser/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/3rdparty/libcsvparser/libcsvparser.pro CONFIG+=release ) && make -f Makefile
Project MESSAGE: using unix config
make[2]: Entering directory '/elmaven/ElMaven/3rdparty/libcsvparser'
compiling csvparser.c
rm -f /elmaven/build/libs/libcsvparser.a
ar cqs /elmaven/build/libs/libcsvparser.a /elmaven/build/tmp/csv_parser/csvparser.o
make[2]: Leaving directory '/elmaven/ElMaven/3rdparty/libcsvparser'
cd pugixml/src/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/3rdparty/pugixml/src/src.pro CONFIG+=release ) && make -f Makefile
Project MESSAGE: using unix config
make[2]: Entering directory '/elmaven/ElMaven/3rdparty/pugixml/src'
compiling pugixml.cpp
rm -f /elmaven/build/libs/libpugixml.a
ar cqs /elmaven/build/libs/libpugixml.a /elmaven/build/tmp/pugixml/pugixml.o
make[2]: Leaving directory '/elmaven/ElMaven/3rdparty/pugixml/src'
cd libpls/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/3rdparty/libpls/libpls.pro CONFIG+=release ) && make -f Makefile
Project MESSAGE: using unix config
make[2]: Entering directory '/elmaven/ElMaven/3rdparty/libpls'
compiling utility.cpp
rm -f /elmaven/build/libs/libpls.a
ar cqs /elmaven/build/libs/libpls.a /elmaven/build/tmp/pls/utility.o
make[2]: Leaving directory '/elmaven/ElMaven/3rdparty/libpls'
cd Logger/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/3rdparty/Logger/Logger.pro CONFIG+=release ) && make -f Makefile
make[2]: Entering directory '/elmaven/ElMaven/3rdparty/Logger'
g++ -c -pipe -std=c++11 -O2 -fPIC -Wall -Wextra -D_REENTRANT -DQT_NO_DEBUG -DQT_GUI_LIB -DQT_CORE_LIB -I. -Ispdlog -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/elmaven/build/tmp/logger -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/logger/elmavenlogger.o elmavenlogger.cpp
rm -f /elmaven/build/libs/libLogger.a
ar cqs /elmaven/build/libs/libLogger.a /elmaven/build/tmp/logger/elmavenlogger.o
make[2]: Leaving directory '/elmaven/ElMaven/3rdparty/Logger'
cd ErrorHandling/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/3rdparty/ErrorHandling/ErrorHandling.pro CONFIG+=release ) && make -f Makefile
make[2]: Entering directory '/elmaven/ElMaven/3rdparty/ErrorHandling'
g++ -c -pipe -std=c++11 -O2 -fPIC -Wall -Wextra -D_REENTRANT -DQT_NO_DEBUG -DQT_GUI_LIB -DQT_CORE_LIB -I. -I../Logger -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/elmaven/build/tmp/error_handling -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/error_handling/MavenException.o MavenException.cpp
g++ -c -pipe -std=c++11 -O2 -fPIC -Wall -Wextra -D_REENTRANT -DQT_NO_DEBUG -DQT_GUI_LIB -DQT_CORE_LIB -I. -I../Logger -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/elmaven/build/tmp/error_handling -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/error_handling/errorcodes.o errorcodes.cpp
rm -f /elmaven/build/libs/libErrorHandling.a
ar cqs /elmaven/build/libs/libErrorHandling.a /elmaven/build/tmp/error_handling/MavenException.o /elmaven/build/tmp/error_handling/errorcodes.o
make[2]: Leaving directory '/elmaven/ElMaven/3rdparty/ErrorHandling'
cd libsvm/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/3rdparty/libsvm/libsvm.pro CONFIG+=release ) && make -f Makefile
make[2]: Entering directory '/elmaven/ElMaven/3rdparty/libsvm'
g++ -c -pipe -O2 -fPIC -Wall -Wextra -D_REENTRANT -DQT_NO_DEBUG -DQT_GUI_LIB -DQT_CORE_LIB -I. -I. -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/elmaven/build/tmp/svm -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/svm/svm.o svm.cpp
rm -f /elmaven/build/libs/libsvm.a
ar cqs /elmaven/build/libs/libsvm.a /elmaven/build/tmp/svm/svm.o
make[2]: Leaving directory '/elmaven/ElMaven/3rdparty/libsvm'
cd NimbleDSP/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/3rdparty/NimbleDSP/NimbleDSP.pro CONFIG+=release ) && make -f Makefile
make[2]: Entering directory '/elmaven/ElMaven/3rdparty/NimbleDSP'
cd src/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/3rdparty/NimbleDSP/src/src.pro CONFIG+=release ) && make -f Makefile
make[3]: Entering directory '/elmaven/ElMaven/3rdparty/NimbleDSP/src'
gcc -c -pipe -O2 -fPIC -w -I. -I../../../src -I/usr/local/include -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/nimble/kiss_fft.o kiss_fft.c
gcc -c -pipe -O2 -fPIC -w -I. -I../../../src -I/usr/local/include -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/nimble/kiss_fftr.o kiss_fftr.c
rm -f /elmaven/build/libs/libNimbleDSP.a
ar cqs /elmaven/build/libs/libNimbleDSP.a /elmaven/build/tmp/nimble/kiss_fft.o /elmaven/build/tmp/nimble/kiss_fftr.o
make[3]: Leaving directory '/elmaven/ElMaven/3rdparty/NimbleDSP/src'
make[2]: Leaving directory '/elmaven/ElMaven/3rdparty/NimbleDSP'
cd libmgf/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/3rdparty/libmgf/libmgf.pro CONFIG+=release ) && make -f Makefile
make[2]: Entering directory '/elmaven/ElMaven/3rdparty/libmgf'
cd src/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/3rdparty/libmgf/src/src.pro CONFIG+=release ) && make -f Makefile
make[3]: Entering directory '/elmaven/ElMaven/3rdparty/libmgf/src'
bash parsergen.sh
g++ -c -pipe -std=c++11 -O2 -fPIC -std=gnu++11 -w -I. -I. -I../mgf -I/usr/local/include -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/libmgf/MgfFile.o MgfFile.cpp
g++ -c -pipe -std=c++11 -O2 -fPIC -std=gnu++11 -w -I. -I. -I../mgf -I/usr/local/include -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/libmgf/MgfHeader.o MgfHeader.cpp
g++ -c -pipe -std=c++11 -O2 -fPIC -std=gnu++11 -w -I. -I. -I../mgf -I/usr/local/include -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/libmgf/MgfSpectrum.o MgfSpectrum.cpp
The scanner and parser are up to date.
g++ -c -pipe -std=c++11 -O2 -fPIC -std=gnu++11 -w -I. -I. -I../mgf -I/usr/local/include -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/libmgf/Driver.o Driver.cpp
g++ -c -pipe -std=c++11 -O2 -fPIC -std=gnu++11 -w -I. -I. -I../mgf -I/usr/local/include -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/libmgf/Parser.o Parser.cpp
g++ -c -pipe -std=c++11 -O2 -fPIC -std=gnu++11 -w -I. -I. -I../mgf -I/usr/local/include -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/libmgf/Scanner.o Scanner.cpp
rm -f /elmaven/build/libs/libmgf.a
ar cqs /elmaven/build/libs/libmgf.a /elmaven/build/tmp/libmgf/Driver.o /elmaven/build/tmp/libmgf/MgfFile.o /elmaven/build/tmp/libmgf/MgfHeader.o /elmaven/build/tmp/libmgf/MgfSpectrum.o /elmaven/build/tmp/libmgf/Parser.o /elmaven/build/tmp/libmgf/Scanner.o
make[3]: Leaving directory '/elmaven/ElMaven/3rdparty/libmgf/src'
make[2]: Leaving directory '/elmaven/ElMaven/3rdparty/libmgf'
make[1]: Leaving directory '/elmaven/ElMaven/3rdparty'
cd src/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/src/src.pro CONFIG+=release ) && make -f Makefile
make[1]: Entering directory '/elmaven/ElMaven/src'
cd core/libmaven/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/src/core/libmaven/libmaven.pro CONFIG+=release ) && make -f Makefile
Project MESSAGE: using unix config
Project MESSAGE: /usr/local/include/ /elmaven/ElMaven/3rdparty/obiwarp /elmaven/ElMaven/3rdparty/pugixml/src/ /elmaven/ElMaven/3rdparty/libcdfread/ /elmaven/ElMaven/src/gui/mzroll/ /elmaven/ElMaven/3rdparty/libneural/ /elmaven/ElMaven/3rdparty/libcsvparser /elmaven/ElMaven/3rdparty/libdate/ /elmaven/ElMaven/3rdparty/ErrorHandling /elmaven/ElMaven/3rdparty/obiwarp/ /elmaven/ElMaven/3rdparty/Eigen/ /elmaven/ElMaven/3rdparty/libsvm /elmaven/ElMaven/3rdparty/NimbleDSP/src /elmaven/ElMaven/3rdparty/doctest /elmaven/ElMaven/3rdparty/json /elmaven/ElMaven/tests/test-libmaven /elmaven/ElMaven/3rdparty/libmgf
make[2]: Entering directory '/elmaven/ElMaven/src/core/libmaven'
compiling base64.cpp
compiling massslicer.cpp
compiling mzMassCalculator.cpp
compiling mzPatterns.cpp
compiling mzSample.cpp
compiling mzUtils.cpp
compiling peakdetector.cpp
compiling statistics.cpp
compiling elementMass.cpp
compiling mzFit.cpp
compiling mzAligner.cpp
compiling PeakGroup.cpp
compiling Fragment.cpp
compiling EIC.cpp
compiling Scan.cpp
compiling SRMList.cpp
compiling Peak.cpp
compiling Compound.cpp
compiling savgol.cpp
compiling SavGolSmoother.cpp
compiling mavenparameters.cpp
compiling classifier.cpp
compiling classifierNaiveBayes.cpp
compiling classifierNeuralNet.cpp
compiling csvreports.cpp
compiling comparesampleslogic.cpp
compiling isotopelogic.cpp
compiling eiclogic.cpp
compiling database.cpp
compiling PolyAligner.cpp
compiling jsonReports.cpp
compiling masscutofftype.cpp
compiling peakFiltering.cpp
compiling groupFiltering.cpp
compiling datastructures/adduct.cpp
compiling datastructures/mzSlice.cpp
compiling groupClassifier.cpp
compiling groupFeatures.cpp
compiling svmPredictor.cpp
compiling zlib.cpp
compiling spectrallibexport.cpp
compiling datastructures/isotope.cpp
In file included from /usr/include/boost/bind/detail/requires_cxx11.hpp:9,
from /usr/include/boost/bind/bind.hpp:24,
from /usr/include/boost/bind.hpp:29,
from peakdetector.cpp:6:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from mavenparameters.h:6,
from mavenparameters.cpp:3:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from massslicer.cpp:3:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from mavenparameters.h:6,
from groupFiltering.cpp:5:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ./mavenparameters.h:6,
from ../../../tests/test-libmaven/testUtils.h:7,
from csvreports.cpp:2:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from mavenparameters.h:6,
from peakFiltering.cpp:4:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ./mavenparameters.h:6,
from ../../../tests/test-libmaven/testUtils.h:7,
from Compound.cpp:7:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from mavenparameters.h:6,
from eiclogic.cpp:5:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from mzAligner.h:5,
from mzAligner.cpp:4:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from mavenparameters.h:6,
from PeakGroup.cpp:9:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from mavenparameters.h:6,
from EIC.cpp:5:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ./mavenparameters.h:6,
from ../../../tests/test-libmaven/testUtils.h:7,
from jsonReports.cpp:3:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
rm -f /elmaven/build/libs/libmaven.a
ar cqs /elmaven/build/libs/libmaven.a /elmaven/build/tmp/maven/base64.o /elmaven/build/tmp/maven/massslicer.o /elmaven/build/tmp/maven/mzMassCalculator.o /elmaven/build/tmp/maven/mzPatterns.o /elmaven/build/tmp/maven/mzSample.o /elmaven/build/tmp/maven/mzUtils.o /elmaven/build/tmp/maven/peakdetector.o /elmaven/build/tmp/maven/statistics.o /elmaven/build/tmp/maven/elementMass.o /elmaven/build/tmp/maven/mzFit.o /elmaven/build/tmp/maven/mzAligner.o /elmaven/build/tmp/maven/PeakGroup.o /elmaven/build/tmp/maven/Fragment.o /elmaven/build/tmp/maven/EIC.o /elmaven/build/tmp/maven/Scan.o /elmaven/build/tmp/maven/SRMList.o /elmaven/build/tmp/maven/Peak.o /elmaven/build/tmp/maven/Compound.o /elmaven/build/tmp/maven/savgol.o /elmaven/build/tmp/maven/SavGolSmoother.o /elmaven/build/tmp/maven/mavenparameters.o /elmaven/build/tmp/maven/classifier.o /elmaven/build/tmp/maven/classifierNaiveBayes.o /elmaven/build/tmp/maven/classifierNeuralNet.o /elmaven/build/tmp/maven/csvreports.o /elmaven/build/tmp/maven/comparesampleslogic.o /elmaven/build/tmp/maven/isotopelogic.o /elmaven/build/tmp/maven/eiclogic.o /elmaven/build/tmp/maven/database.o /elmaven/build/tmp/maven/PolyAligner.o /elmaven/build/tmp/maven/jsonReports.o /elmaven/build/tmp/maven/masscutofftype.o /elmaven/build/tmp/maven/peakFiltering.o /elmaven/build/tmp/maven/groupFiltering.o /elmaven/build/tmp/maven/adduct.o /elmaven/build/tmp/maven/mzSlice.o /elmaven/build/tmp/maven/groupClassifier.o /elmaven/build/tmp/maven/groupFeatures.o /elmaven/build/tmp/maven/svmPredictor.o /elmaven/build/tmp/maven/zlib.o /elmaven/build/tmp/maven/spectrallibexport.o /elmaven/build/tmp/maven/isotope.o
make[2]: Leaving directory '/elmaven/ElMaven/src/core/libmaven'
cd common/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/src/common/common.pro CONFIG+=release ) && make -f Makefile
Project MESSAGE: using unix config
make[2]: Entering directory '/elmaven/ElMaven/src/common'
compiling downloadmanager.cpp
compiling logger.cpp
compiling analytics.cpp
compiling mixpanel.cpp
generating /elmaven/ElMaven/../build/tmp/common//moc_predefs.h
moc downloadmanager.h
compiling /elmaven/build/tmp/common/moc_downloadmanager.cpp
logger.cpp: In function 'void _clearOldLogs(boost::filesystem::path, std::string)':
logger.cpp:28:33: warning: 'std::string boost::filesystem::extension(const path&)' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
28 | && fs::extension(path) == extension
| ~~~~~~~~~~~~~^~~~~~
In file included from /usr/include/boost/filesystem.hpp:21,
from logger.cpp:1:
/usr/include/boost/filesystem/convenience.hpp:29:20: note: declared here
29 | inline std::string extension(const path& p)
| ^~~~~~~~~
analytics.cpp: In member function 'void Analytics::httpPost(QUrlQuery)':
analytics.cpp:104:16: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations]
104 | data.append(query.query());
| ~~~~~~~~~~~^~~~~~~~~~~~~~~
In file included from /usr/include/x86_64-linux-gnu/qt5/QtCore/qcoreapplication.h:44,
from /usr/include/x86_64-linux-gnu/qt5/QtCore/QCoreApplication:1,
from analytics.cpp:1:
/usr/include/x86_64-linux-gnu/qt5/QtCore/qstring.h:1508:20: note: declared here
1508 | inline QByteArray &QByteArray::append(const QString &s)
| ^~~~~~~~~~
analytics.cpp:108:20: warning: unused variable 'reply' [-Wunused-variable]
108 | QNetworkReply reply = manager->post(req, data);
| ^~~~~
In file included from downloadmanager.cpp:6:
downloadmanager.h: In constructor 'DownloadManager::DownloadManager()':
downloadmanager.h:42:20: warning: 'DownloadManager::_reply' will be initialized after [-Wreorder]
42 | QNetworkReply _reply;
| ^~~~~~
downloadmanager.h:19:10: warning: 'bool DownloadManager::err' [-Wreorder]
19 | bool err;
| ^~~
downloadmanager.cpp:10:1: warning: when initialized here [-Wreorder]
10 | DownloadManager::DownloadManager():
| ^~~~~~~~~~~~~~~
downloadmanager.cpp: In member function 'void DownloadManager::download(bool)':
downloadmanager.cpp:52:67: warning: 'void QNetworkReply::error(NetworkError)' is deprecated: Use QNetworkReply::errorOccurred(QNetworkReply::NetworkError) instead [-Wdeprecated-declarations]
52 | connect(_reply, QOverloadQNetworkReply::NetworkError::of(&QNetworkReply::error),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/x86_64-linux-gnu/qt5/QtNetwork/QNetworkReply:1,
from downloadmanager.cpp:3:
/usr/include/x86_64-linux-gnu/qt5/QtNetwork/qnetworkreply.h:161:10: note: declared here
161 | void error(QNetworkReply::NetworkError);
| ^~~~~
downloadmanager.cpp:52:67: warning: 'void QNetworkReply::error(NetworkError)' is deprecated: Use QNetworkReply::errorOccurred(QNetworkReply::NetworkError) instead [-Wdeprecated-declarations]
52 | connect(_reply, QOverloadQNetworkReply::NetworkError::of(&QNetworkReply::error),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/x86_64-linux-gnu/qt5/QtNetwork/qnetworkreply.h:161:10: note: declared here
161 | void error(QNetworkReply::NetworkError);
| ^~~~~
downloadmanager.cpp:72:67: warning: 'void QNetworkReply::error(NetworkError)' is deprecated: Use QNetworkReply::errorOccurred(QNetworkReply::NetworkError) instead [-Wdeprecated-declarations]
72 | connect(_reply, QOverloadQNetworkReply::NetworkError::of(&QNetworkReply::error),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/x86_64-linux-gnu/qt5/QtNetwork/qnetworkreply.h:161:10: note: declared here
161 | void error(QNetworkReply::NetworkError);
| ^~~~~
downloadmanager.cpp:72:67: warning: 'void QNetworkReply::error(NetworkError)' is deprecated: Use QNetworkReply::errorOccurred(QNetworkReply::NetworkError) instead [-Wdeprecated-declarations]
72 | connect(_reply, QOverloadQNetworkReply::NetworkError::of(&QNetworkReply::error),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/x86_64-linux-gnu/qt5/QtNetwork/qnetworkreply.h:161:10: note: declared here
161 | void error(QNetworkReply::NetworkError);
| ^~~~~
mixpanel.cpp: In member function 'void Mixpanel::_httpRequest(QByteArray, bool, bool) const':
mixpanel.cpp:125:18: warning: 'QByteArray& QByteArray::append(const QString&)' is deprecated: Use QString's toUtf8(), toLatin1() or toLocal8Bit() [-Wdeprecated-declarations]
125 | params.append(query.query());
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~
In file included from /usr/include/x86_64-linux-gnu/qt5/QtCore/qobject.h:47,
from /usr/include/x86_64-linux-gnu/qt5/QtCore/qabstractanimation.h:43,
from /usr/include/x86_64-linux-gnu/qt5/QtCore/QtCore:6,
from mixpanel.cpp:6:
/usr/include/x86_64-linux-gnu/qt5/QtCore/qstring.h:1508:20: note: declared here
1508 | inline QByteArray &QByteArray::append(const QString &s)
| ^~~~~~~~~~
rm -f /elmaven/build/libs/libcommon.a
ar cqs /elmaven/build/libs/libcommon.a /elmaven/build/tmp/common/downloadmanager.o /elmaven/build/tmp/common/logger.o /elmaven/build/tmp/common/analytics.o /elmaven/build/tmp/common/mixpanel.o /elmaven/build/tmp/common/moc_downloadmanager.o
make[2]: Leaving directory '/elmaven/ElMaven/src/common'
cd pollyCLI/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/src/pollyCLI/pollyCLI.pro CONFIG+=release ) && make -f Makefile
make[2]: Entering directory '/elmaven/ElMaven/src/pollyCLI'
g++ -c -pipe -std=c++11 -O2 -fPIC -w -D_REENTRANT -DQT_NO_DEBUG -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -I. -I../../src -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/elmaven/build/tmp/pollyCLI -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/pollyCLI/pollyintegration.o pollyintegration.cpp
g++ -pipe -std=c++11 -O2 -fPIC -w -dM -E -o /elmaven/build/tmp/pollyCLI/moc_predefs.h /usr/lib/x86_64-linux-gnu/qt5/mkspecs/features/data/dummy.cpp
/usr/lib/qt5/bin/moc -DQT_NO_DEBUG -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB --include /elmaven/build/tmp/pollyCLI/moc_predefs.h -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -I/elmaven/ElMaven/src/pollyCLI -I/elmaven/ElMaven/src -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/usr/include/c++/13 -I/usr/include/x86_64-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-linux-gnu/13/include -I/usr/local/include -I/usr/include/x86_64-linux-gnu -I/usr/include pollyintegration.h -o /elmaven/build/tmp/pollyCLI/moc_pollyintegration.cpp
g++ -c -pipe -std=c++11 -O2 -fPIC -w -D_REENTRANT -DQT_NO_DEBUG -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -I. -I../../src -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtNetwork -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I/elmaven/build/tmp/pollyCLI -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/pollyCLI/moc_pollyintegration.o /elmaven/build/tmp/pollyCLI/moc_pollyintegration.cpp
rm -f /elmaven/build/libs/libpollyCLI.a
ar cqs /elmaven/build/libs/libpollyCLI.a /elmaven/build/tmp/pollyCLI/pollyintegration.o /elmaven/build/tmp/pollyCLI/moc_pollyintegration.o
make[2]: Leaving directory '/elmaven/ElMaven/src/pollyCLI'
cd projectDB/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/src/projectDB/projectDB.pro CONFIG+=release ) && make -f Makefile
make[2]: Entering directory '/elmaven/ElMaven/src/projectDB'
g++ -c -pipe -std=c++11 -O2 -fPIC -w -D_REENTRANT -DQT_NO_DEBUG -DQT_GUI_LIB -DQT_CORE_LIB -I. -I../core/libmaven -I../../3rdparty/obiwarp -I../../3rdparty/pugixml/src -I../../3rdparty/libneural -I../../3rdparty/Eigen -I../../3rdparty/libpls -I../../3rdparty/libcsvparser -I../../3rdparty/libcdfread -I../../3rdparty -I../../3rdparty/libdate -I../../3rdparty/ErrorHandling -I../../3rdparty/Logger -I../pollyCLI -I/usr/local/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/projectDB/connection.o connection.cpp
g++ -c -pipe -std=c++11 -O2 -fPIC -w -D_REENTRANT -DQT_NO_DEBUG -DQT_GUI_LIB -DQT_CORE_LIB -I. -I../core/libmaven -I../../3rdparty/obiwarp -I../../3rdparty/pugixml/src -I../../3rdparty/libneural -I../../3rdparty/Eigen -I../../3rdparty/libpls -I../../3rdparty/libcsvparser -I../../3rdparty/libcdfread -I../../3rdparty -I../../3rdparty/libdate -I../../3rdparty/ErrorHandling -I../../3rdparty/Logger -I../pollyCLI -I/usr/local/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/projectDB/cursor.o cursor.cpp
g++ -c -pipe -std=c++11 -O2 -fPIC -w -D_REENTRANT -DQT_NO_DEBUG -DQT_GUI_LIB -DQT_CORE_LIB -I. -I../core/libmaven -I../../3rdparty/obiwarp -I../../3rdparty/pugixml/src -I../../3rdparty/libneural -I../../3rdparty/Eigen -I../../3rdparty/libpls -I../../3rdparty/libcsvparser -I../../3rdparty/libcdfread -I../../3rdparty -I../../3rdparty/libdate -I../../3rdparty/ErrorHandling -I../../3rdparty/Logger -I../pollyCLI -I/usr/local/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/projectDB/projectdatabase.o projectdatabase.cpp
g++ -c -pipe -std=c++11 -O2 -fPIC -w -D_REENTRANT -DQT_NO_DEBUG -DQT_GUI_LIB -DQT_CORE_LIB -I. -I../core/libmaven -I../../3rdparty/obiwarp -I../../3rdparty/pugixml/src -I../../3rdparty/libneural -I../../3rdparty/Eigen -I../../3rdparty/libpls -I../../3rdparty/libcsvparser -I../../3rdparty/libcdfread -I../../3rdparty -I../../3rdparty/libdate -I../../3rdparty/ErrorHandling -I../../3rdparty/Logger -I../pollyCLI -I/usr/local/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/projectDB/projectversioning.o projectversioning.cpp
g++ -c -pipe -std=c++11 -O2 -fPIC -w -D_REENTRANT -DQT_NO_DEBUG -DQT_GUI_LIB -DQT_CORE_LIB -I. -I../core/libmaven -I../../3rdparty/obiwarp -I../../3rdparty/pugixml/src -I../../3rdparty/libneural -I../../3rdparty/Eigen -I../../3rdparty/libpls -I../../3rdparty/libcsvparser -I../../3rdparty/libcdfread -I../../3rdparty -I../../3rdparty/libdate -I../../3rdparty/ErrorHandling -I../../3rdparty/Logger -I../pollyCLI -I/usr/local/include -I/usr/include/x86_64-linux-gnu/qt5 -I/usr/include/x86_64-linux-gnu/qt5/QtGui -I/usr/include/x86_64-linux-gnu/qt5/QtCore -I. -I/usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ -o /elmaven/build/tmp/projectDB/mzrolldbconverter.o mzrolldbconverter.cpp
In file included from /usr/include/boost/system/detail/requires_cxx11.hpp:9,
from /usr/include/boost/system/detail/config.hpp:11,
from /usr/include/boost/system/detail/error_category.hpp:13,
from /usr/include/boost/system/error_category.hpp:10,
from /usr/include/boost/filesystem/detail/path_traits.hpp:25,
from /usr/include/boost/filesystem/path.hpp:21,
from /usr/include/boost/filesystem.hpp:16,
from projectdatabase.cpp:3:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
rm -f /elmaven/build/libs/libprojectDB.a
ar cqs /elmaven/build/libs/libprojectDB.a /elmaven/build/tmp/projectDB/connection.o /elmaven/build/tmp/projectDB/cursor.o /elmaven/build/tmp/projectDB/projectdatabase.o /elmaven/build/tmp/projectDB/projectversioning.o /elmaven/build/tmp/projectDB/mzrolldbconverter.o
make[2]: Leaving directory '/elmaven/ElMaven/src/projectDB'
cd gui/mzroll/ && ( test -e Makefile || /usr/lib/qt5/bin/qmake -o Makefile /elmaven/ElMaven/src/gui/mzroll/mzroll.pro CONFIG+=release ) && make -f Makefile
Cannot read /elmaven/ElMaven/3rdparty/phantomstyle/src/phantom/phantom.pri: No such file or directory
Project MESSAGE: using unix config
fatal: not a git repository (or any parent up to mount point /)
Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
make[2]: Entering directory '/elmaven/ElMaven/src/gui/mzroll'
uic forms/settingsform.ui
uic forms/isotopeswidget.ui
uic forms/librarymanager.ui
uic forms/masscalcwidget.ui
uic forms/peakdetectiondialog.ui
uic forms/pollyelmaveninterface.ui
uic forms/comparesamplesdialog.ui
uic forms/alignmentdialog.ui
uic forms/clusterdialog.ui
uic forms/loginform.ui
uic forms/aboutpolly.ui
uic forms/samplertwidget.ui
uic forms/isotopeplotdockwidget.ui
uic forms/pollywaitdialog.ui
uic forms/peaktabledeletiondialog.ui
uic forms/isotopedialog.ui
uic forms/infodialog.ui
uic forms/adductwidget.ui
uic forms/updatedialog.ui
uic forms/peakeditor.ui
uic forms/groupsettingslog.ui
rcc mzroll.qrc
compiling stable.h
compiling mainwindow.cpp
compiling backgroundopsthread.cpp
compiling infodialog.cpp
compiling isotopeswidget.cpp
compiling librarymanager.cpp
compiling plotdock.cpp
compiling spectralhit.cpp
compiling treedockwidget.cpp
compiling tinyplot.cpp
compiling settingsform.cpp
compiling isotopeplot.cpp
compiling barplot.cpp
compiling boxplot.cpp
compiling point.cpp
compiling history.cpp
compiling spectrawidget.cpp
compiling masscalcgui.cpp
compiling ligandwidget.cpp
compiling main.cpp
compiling eicwidget.cpp
compiling plot_axes.cpp
compiling tabledockwidget.cpp
compiling peakdetectiondialog.cpp
compiling pollyelmaveninterface.cpp
compiling comparesamplesdialog.cpp
compiling line.cpp
compiling suggest.cpp
compiling alignmentdialog.cpp
compiling scatterplot.cpp
compiling gallerywidget.cpp
compiling clusterdialog.cpp
compiling aboutpolly.cpp
compiling projectdockwidget.cpp
compiling mzfileio.cpp
compiling loginform.cpp
compiling grouprtwidget.cpp
compiling alignmentvizallgroupswidget.cpp
compiling qcustomplot.cpp
compiling saveJson.cpp
compiling samplertwidget.cpp
compiling controller.cpp
compiling numeric_treewidgetitem.cpp
compiling isotopeplotdockwidget.cpp
compiling pollywaitdialog.cpp
compiling peaktabledeletiondialog.cpp
compiling notificator.cpp
compiling videoplayer.cpp
compiling isotopedialog.cpp
compiling adductwidget.cpp
compiling updatedialog.cpp
compiling peakeditor.cpp
compiling groupsettingslog.cpp
compiling projectsaveworker.cpp
generating /elmaven/ElMaven/../build/tmp/mzroll//moc_predefs.h
moc backgroundopsthread.h
moc infodialog.h
moc isotopeswidget.h
moc librarymanager.h
moc mainwindow.h
moc tinyplot.h
moc plotdock.h
moc settingsform.h
moc isotopeplot.h
moc barplot.h
moc boxplot.h
moc point.h
moc history.h
moc spectrawidget.h
moc masscalcgui.h
moc ligandwidget.h
moc eicwidget.h
moc peakdetectiondialog.h
moc pollyelmaveninterface.h
moc comparesamplesdialog.h
moc tabledockwidget.h
moc treedockwidget.h
moc suggest.h
moc alignmentdialog.h
moc scatterplot.h
moc projectdockwidget.h
moc gallerywidget.h
moc mzfileio.h
moc grouprtwidget.h
moc alignmentvizallgroupswidget.h
moc clusterdialog.h
moc loginform.h
moc aboutpolly.h
moc qcustomplot.h
moc saveJson.h
moc messageBoxResize.h
moc samplertwidget.h
moc controller.h
moc isotopeplotdockwidget.h
moc pollywaitdialog.h
moc peaktabledeletiondialog.h
moc notificator.h
moc videoplayer.h
moc isotopedialog.h
moc adductwidget.h
moc updatedialog.h
moc peakeditor.h
moc groupsettingslog.h
moc projectsaveworker.h
compiling /elmaven/build/tmp/mzroll/moc_saveJson.cpp
compiling /elmaven/build/tmp/mzroll/moc_projectsaveworker.cpp
compiling /elmaven/build/tmp/mzroll/moc_librarymanager.cpp
compiling /elmaven/build/tmp/mzroll/moc_infodialog.cpp
compiling /elmaven/build/tmp/mzroll/moc_messageBoxResize.cpp
compiling /elmaven/build/tmp/mzroll/moc_peaktabledeletiondialog.cpp
compiling /elmaven/build/tmp/mzroll/moc_pollywaitdialog.cpp
compiling /elmaven/build/tmp/mzroll/moc_loginform.cpp
compiling /elmaven/build/tmp/mzroll/moc_notificator.cpp
compiling /elmaven/build/tmp/mzroll/moc_updatedialog.cpp
compiling /elmaven/build/tmp/mzroll/moc_videoplayer.cpp
compiling /elmaven/build/tmp/mzroll/moc_peakeditor.cpp
compiling /elmaven/build/tmp/mzroll/moc_settingsform.cpp
compiling /elmaven/build/tmp/mzroll/moc_isotopeplotdockwidget.cpp
compiling /elmaven/build/tmp/mzroll/moc_aboutpolly.cpp
compiling /elmaven/build/tmp/mzroll/moc_groupsettingslog.cpp
compiling /elmaven/build/tmp/mzroll/moc_comparesamplesdialog.cpp
compiling /elmaven/build/tmp/mzroll/moc_mzfileio.cpp
compiling /elmaven/build/tmp/mzroll/moc_samplertwidget.cpp
compiling /elmaven/build/tmp/mzroll/moc_plotdock.cpp
compiling /elmaven/build/tmp/mzroll/moc_controller.cpp
compiling /elmaven/build/tmp/mzroll/moc_boxplot.cpp
compiling /elmaven/build/tmp/mzroll/moc_peakdetectiondialog.cpp
compiling /elmaven/build/tmp/mzroll/moc_qcustomplot.cpp
compiling /elmaven/build/tmp/mzroll/moc_ligandwidget.cpp
compiling /elmaven/build/tmp/mzroll/moc_spectrawidget.cpp
compiling /elmaven/build/tmp/mzroll/moc_backgroundopsthread.cpp
compiling /elmaven/build/tmp/mzroll/moc_tabledockwidget.cpp
compiling /elmaven/build/tmp/mzroll/moc_masscalcgui.cpp
compiling /elmaven/build/tmp/mzroll/moc_barplot.cpp
compiling /elmaven/build/tmp/mzroll/moc_isotopeplot.cpp
compiling /elmaven/build/tmp/mzroll/moc_tinyplot.cpp
compiling /elmaven/build/tmp/mzroll/moc_history.cpp
compiling /elmaven/build/tmp/mzroll/moc_alignmentvizallgroupswidget.cpp
compiling /elmaven/build/tmp/mzroll/moc_suggest.cpp
compiling /elmaven/build/tmp/mzroll/moc_adductwidget.cpp
compiling /elmaven/build/tmp/mzroll/moc_clusterdialog.cpp
compiling /elmaven/build/tmp/mzroll/moc_mainwindow.cpp
compiling /elmaven/build/tmp/mzroll/moc_alignmentdialog.cpp
compiling /elmaven/build/tmp/mzroll/moc_eicwidget.cpp
main.cpp:30:10: fatal error: phantomstyle.h: No such file or directory
30 | #include "phantomstyle.h"
| ^~~~~~~~~~~~~~~~
compilation terminated.
compiling /elmaven/build/tmp/mzroll/moc_projectdockwidget.cpp
make[2]: *** [Makefile:11053: /elmaven/build/tmp/mzroll/main.o] Error 1
make[2]: *** Waiting for unfinished jobs....
mainwindow.cpp:41:10: fatal error: phantomcolor.h: No such file or directory
41 | #include "phantomcolor.h"
| ^~~~~~~~~~~~~~~~
compilation terminated.
make[2]: *** [Makefile:7062: /elmaven/build/tmp/mzroll/mainwindow.o] Error 1
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from /elmaven/build/tmp/mzroll/../../../ElMaven/src/gui/mzroll/projectdockwidget.h:4,
from /elmaven/build/tmp/mzroll/moc_projectdockwidget.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/type_index.hpp:25,
from /usr/include/boost/variant/variant.hpp:21,
from /usr/include/boost/variant.hpp:17,
from ../../projectDB/projectdatabase.h:16,
from alignmentdialog.h:5,
from backgroundopsthread.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ../../core/libmaven/database.h:4,
from mainwindow.h:10,
from isotopeplotdockwidget.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ../../core/libmaven/database.h:4,
from mainwindow.h:10,
from masscalcgui.cpp:5:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ../../core/libmaven/database.h:4,
from mainwindow.h:10,
from spectrawidget.cpp:8:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/type_index.hpp:25,
from /usr/include/boost/variant/variant.hpp:21,
from /usr/include/boost/variant.hpp:17,
from ../../projectDB/projectdatabase.h:16,
from alignmentdialog.h:5,
from peakdetectiondialog.cpp:5:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from mzfileio.cpp:3:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ../../core/libmaven/database.h:4,
from mainwindow.h:10,
from settingsform.cpp:7:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/type_index.hpp:25,
from /usr/include/boost/variant/variant.hpp:21,
from /usr/include/boost/variant.hpp:17,
from ../../projectDB/projectdatabase.h:16,
from controller.h:4,
from pollyelmaveninterface.cpp:4:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ../../core/libmaven/database.h:4,
from adductwidget.cpp:4:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/type_index.hpp:25,
from /usr/include/boost/variant/variant.hpp:21,
from /usr/include/boost/variant.hpp:17,
from ../../projectDB/projectdatabase.h:16,
from alignmentdialog.h:5,
from ligandwidget.cpp:5:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ../../core/libmaven/database.h:4,
from mainwindow.h:10,
from projectdockwidget.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/type_index.hpp:25,
from /usr/include/boost/variant/variant.hpp:21,
from /usr/include/boost/variant.hpp:17,
from ../../projectDB/projectdatabase.h:16,
from alignmentdialog.h:5,
from alignmentdialog.cpp:3:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/type_index.hpp:25,
from /usr/include/boost/variant/variant.hpp:21,
from /usr/include/boost/variant.hpp:17,
from ../../projectDB/projectdatabase.h:16,
from alignmentdialog.h:5,
from controller.cpp:10:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ../../core/libmaven/database.h:4,
from mainwindow.h:10,
from isotopeswidget.cpp:12:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ../../core/libmaven/database.h:4,
from mainwindow.h:10,
from peakeditor.cpp:6:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ../../core/libmaven/database.h:4,
from mainwindow.h:10,
from treedockwidget.cpp:5:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ../../core/libmaven/mavenparameters.h:6,
from gallerywidget.cpp:8:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ../../core/libmaven/mavenparameters.h:6,
from groupsettingslog.cpp:9:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ../../core/libmaven/database.h:4,
from mainwindow.h:10,
from grouprtwidget.cpp:7:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ../../core/libmaven/database.h:4,
from mainwindow.h:10,
from isotopeplot.cpp:5:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ../../core/libmaven/database.h:4,
from mainwindow.h:10,
from eicwidget.cpp:17:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9,
from /usr/include/boost/smart_ptr/shared_ptr.hpp:17,
from /usr/include/boost/shared_ptr.hpp:17,
from /usr/include/boost/signals2/deconstruct.hpp:28,
from /usr/include/boost/signals2.hpp:15,
from ../../core/libmaven/database.h:4,
from mainwindow.h:10,
from alignmentvizallgroupswidget.cpp:7:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/type_index.hpp:25,
from /usr/include/boost/variant/variant.hpp:21,
from /usr/include/boost/variant.hpp:17,
from ../../projectDB/projectdatabase.h:16,
from alignmentdialog.h:5,
from samplertwidget.cpp:3:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/type_index.hpp:25,
from /usr/include/boost/variant/variant.hpp:21,
from /usr/include/boost/variant.hpp:17,
from ../../projectDB/projectdatabase.h:16,
from alignmentdialog.h:5,
from tabledockwidget.cpp:5:
/usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.'
36 | BOOST_PRAGMA_MESSAGE(
| ^~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/elmaven/ElMaven/src/gui/mzroll'
make[1]: *** [Makefile:224: sub-gui-mzroll-make_first-ordered] Error 2
make[1]: Leaving directory '/elmaven/ElMaven/src'
make: *** [Makefile:94: sub-src-make_first-ordered] Error 2
run.sh: 18: [[: not found
System (please complete the following information):
NAME="Ubuntu"
VERSION_ID="24.04"
VERSION="24.04.2 LTS (Noble Numbat)"
ElMaven version = v0.12.0
Additional context
Software version
Using built-in specs.
COLLECT_GCC=g++
COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-linux-gnu/13/lto-wrapper
OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa
OFFLOAD_TARGET_DEFAULT=1
Target: x86_64-linux-gnu
Thread model: posix
Supported LTO compression algorithms: zlib zstd
gcc version 13.3.0 (Ubuntu 13.3.0-6ubuntu2~24.04)
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-linux-gnu/13/lto-wrapper
OFFLOAD_TARGET_NAMES=nvptx-none:amdgcn-amdhsa
OFFLOAD_TARGET_DEFAULT=1
Target: x86_64-linux-gnu
Thread model: posix
Supported LTO compression algorithms: zlib zstd
gcc version 13.3.0 (Ubuntu 13.3.0-6ubuntu2~24.04)
QMake version 3.1
Using Qt version 5.15.13 in /usr/lib/x86_64-linux-gnu
libboost-all-dev:
Installed: 1.83.0.1ubuntu2
Candidate: 1.83.0.1ubuntu2
Version table:
*** 1.83.0.1ubuntu2 500
500 http://archive.ubuntu.com/ubuntu noble/universe amd64 Packages
100 /var/lib/dpkg/status