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Part 3: Parsl

kylechard edited this page Nov 15, 2021 · 4 revisions

Model-in-the-Loop Molecular Design with Parsl

  • Instructions (as a Jupyter notebook) are available in the GitHub repository
  • Prepare pre-configured Conda environment on virtual machine:
    cd $HOME/tutorial/
    .  3-ml-parsl.env
  • Alternatively you can configure your own Conda environment (note this will take several minutes):
    conda env create --file environment.yml
  • The tutorial folder has the following content:
    data                        - Sample molecule data from QM9
    figures                     - Figures for the notebook
    chemfunctions.py            - Python functions for computing molecule properties
    environment.yml             - Conda environment file
    molecular-design-with-parsl.ipynb        - Tutorial notebook
    setup.py            - Setup script to install chemfunctions

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