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Copy file name to clipboardExpand all lines: src/pynxtools/nomad/example_uploads/__init__.py
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category="NeXus Experiment Examples",
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description="""
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Sensor Scan - IV Temperature Curve
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This example shows how experimental data can be mapped to a Nexus application definition.
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Here, data from an IV Temperature measurements as taken by a Python framework is
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converted to [`NXiv_temp`](https://fairmat-nfdi.github.io/nexus_definitions/classes/contributed_definitions/NXiv_temp.html).
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We also demonstrate the use of Nexus ELN features of NOMAD to add further details
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This example shows how experimental data can be mapped to a NeXus application definition.
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Here, data from an IV (voltage-vs-current) temperature measurements as taken by a Python framework is
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converted to a NeXus/HDF5 file that complies with the [`NXiv_temp`](https://fairmat-nfdi.github.io/nexus_definitions/classes/contributed_definitions/NXiv_temp.html) application definition.
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We also demonstrate the use of NeXus ELN features of NOMAD to add further details
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which were not provided by the data acquisition software.
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This example demonstrates how
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- a NOMAD ELN can be built and its content can be written to an RDM platform agnostic yaml format
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- a NOMAD ELN can be built and its content written to a yaml file that is RDM platform agnostic
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- NOMAD ELN can be used to combine ELN data with experiment data and export them to NeXus
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- NeXus data is represented as an Entry with searchable quantities in NOMAD
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- NORTH tools can be used to work with data in NOMAD uploads
Copy file name to clipboardExpand all lines: src/pynxtools/nomad/example_uploads/iv_temp_example/README.md
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# Introduction
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This is an example of a PID controlled sensor sweep scan. The temperature is set using a PID controller. Then, for the set temperature, a voltage sweep is performed. For each of the voltages, the current is measured. This is repeated for a given list of temperatures.
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This is an example of a PID controlled sensor sweep scan. The temperature is set using a PID controller. Multiple experiments at different temperatures are performed. For each, a voltage sweep is performed, recording voltage over current.
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This specific data was captured using a Bluesky controlled system. This was then saved into a binary file using Pickle. This example illustrates how such a dataset could be converted using the [`JSONMapReader`](https://github.com/FAIRmat-NFDI/pynxtools/tree/master/src/pynxtools/dataconverter/readers/json_map) of the NOMAD plugin [`pynxtools`](https://github.com/FAIRmat-NFDI/pynxtools).
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The data is mapped on to a Nexus application definition for temperature-dependent IV curve measurements, [NXiv_temp](https://fairmat-nfdi.github.io/nexus_definitions/classes/contributed_definitions/NXiv_temp.html).
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This specific data was captured using a [Bluesky](https://blueskyproject.io/) controlled system, writing to a binary file using Pickle. This example illustrates how such a dataset could be converted using the [`JSONMapReader`](https://github.com/FAIRmat-NFDI/pynxtools/tree/master/src/pynxtools/dataconverter/readers/json_map) of the NOMAD plugin [`pynxtools`](https://github.com/FAIRmat-NFDI/pynxtools).
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The data are mapped onto the NeXus application definition [NXiv_temp](https://fairmat-nfdi.github.io/nexus_definitions/classes/contributed_definitions/NXiv_temp.html) that was developed for documenting temperature-dependent IV curve measurements.
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## Viewing uploaded data
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## Using a Jupyter Notebook
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This example comes with a very simple Jupyter Notebook that shows how one could easily get access to a Python environment with access to all your data in one place.
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To give this a go, click the **FILES** tab and select `IV_temp.ipynb`. Feel free to modify this or just create a new one to try!
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This example comes with a simple Jupyter Notebook that shows how one could easily get access to a Python environment with access to all your data in one place.
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To give this a go, click the **FILES** tab and select `IV_temp.ipynb`. Feel free to modify this notebook or just create a new one to try!
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## Where to go from here?
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If you're interested in using this pipeline and NOMAD in general you'll find support at [FAIRmat](https://www.fairmat-nfdi.eu/fairmat/consortium).
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If you're interested in using this pipeline and NOMAD in general, you'll find support at [FAIRmat](https://www.fairmat-nfdi.eu/fairmat/consortium).
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If you have any questions about this example you may contact [Sherjeel Shabih](https://www.fairmat-nfdi.eu/fairmat/fairmat_/fairmatteam) from the FAIRmat consortium.
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