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1 parent 4c5f423 commit 3888b69Copy full SHA for 3888b69
CPAC/utils/configuration/configuration.py
@@ -118,18 +118,6 @@ def __init__(self, config_map=None):
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# replace spaces with hyphens in Regressor 'Name's
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regressor['Name'] = regressor['Name'].replace(' ', '-')
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- # Don't double-run FreeSurfer
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- try:
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- if 'FreeSurfer-ABCD' in config_map['anatomical_preproc'][
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- 'brain_extraction']['using']:
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- self.set_nested(config_map,
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- ['surface_analysis', 'freesurfer',
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- 'run_reconall'],
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- False)
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- warn(DOUBLERUN_GUARD_MESSAGE)
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- except (KeyError, TypeError):
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- pass
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-
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config_map = schema(config_map)
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# remove 'FROM' before setting attributes now that it's imported
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