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Copy file name to clipboardExpand all lines: CPAC/resources/configs/pipeline_config_abcd-options.yml
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@@ -28,10 +28,6 @@ pipeline_setup:
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# -------------
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surface_analysis:
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# Run ABCD-HCP post FreeSurfer and fMRISurface pipeline
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post_freesurfer:
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run: On
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# Will run Freesurfer for surface-based analysis. Will output traditional Freesurfer derivatives.
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# If you wish to employ Freesurfer outputs for brain masking or tissue segmentation in the voxel-based pipeline,
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# select those 'Freesurfer-' labeled options further below in anatomical_preproc.
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# FreeSurfer will run as part of configured brain extraction in this specific configuration, so FreeSurfer's independent run was automatically disabled.
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run_reconall: Off
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# Run ABCD-HCP post FreeSurfer and fMRISurface pipeline
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