⬆️ Upgrade ANTs to v2.3.4 (from 2.1.0)

Author: shnizzedy

Dockerfile

@@ -151,10 +151,9 @@ RUN mkdir /ants_template && \
     rm -rf /tmp/Oasis.zip /tmp/MICCAI2012-Multi-Atlas-Challenge-Data
 
 # install ANTs
-ENV PATH=/usr/lib/ants:$PATH
-RUN apt-get install -y ants
-# RUN export ANTSPATH=/usr/lib/ants
-ENV ANTSPATH=/usr/lib/ants/
+RUN dev/docker_data/install_ants.sh v2.3.4
+ENV ANTSPATH=/usr/lib/ants/bin/
+ENV PATH=${ANTSPATH}:$PATH
 
 # install ICA-AROMA
 RUN mkdir -p /opt/ICA-AROMA

dev/docker_data/install_ants.sh

@@ -41,9 +41,9 @@ buildThreads=4
 
 # Where to build, should be an empty directory
 buildDir=${workingDir}/build
-installDir=${workingDir}/install
+installDir=/usr/lib/ants
 
-mkdir $buildDir $installDir
+mkdir -p $buildDir $installDir
 
 cd $buildDir