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πŸ“ Document nested config changes (#248)
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β€Ž.circleci/config.ymlβ€Ž

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@@ -15,7 +15,7 @@ commands:
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command: |
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sudo apt-get update && sudo apt-get -y install git python3-dev graphviz graphviz-dev libgraphviz-dev pkg-config python3-sphinx
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pip install --user -r https://raw.githubusercontent.com/FCP-INDI/C-PAC/<< parameters.version >>/requirements.txt
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pip install --user git+https://github.com/${CIRCLE_PROJECT_USERNAME}/C-PAC.git@<< parameters.version >> sphinx m2r numpydoc PyGithub "sphinxcontrib-bibtex<2.0" sphinxcontrib-fulltoc sphinxcontrib-programoutput semver torch
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pip install --user git+https://github.com/${CIRCLE_PROJECT_USERNAME}/C-PAC.git@<< parameters.version >> sphinx m2r numpydoc PyGithub "sphinxcontrib-bibtex<2.0" sphinxcontrib-fulltoc sphinxcontrib-programoutput sphinx-reredirects semver torch
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git clone https://github.com/${CIRCLE_PROJECT_USERNAME}/C-PAC.git /home/circleci/build/C-PAC
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cd /home/circleci/build/C-PAC
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git checkout << parameters.version >>
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source ~/simple/bin/activate
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pip install cpac
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deactivate
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- run:
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name: πŸ–‡οΈ Linking references
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command: |
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CPAC_DIRECTORY=$(python -c "import os, CPAC; print(os.path.abspath(os.path.dirname(CPAC.__file__)))")
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ln ${CPAC_DIRECTORY}/resources/configs/1.7-1.8-nesting-mappings.yml docs/_sources/references/1.7-1.8-nesting-mappings.yml || true
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ln ${CPAC_DIRECTORY}/resources/configs/1.7-1.8-deprecations.yml docs/_sources/references/1.7-1.8-deprecations.yml || true
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curl -o docs/_sources/references/default_pipeline.yml -L https://raw.githubusercontent.com/${CIRCLE_PROJECT_USERNAME}/C-PAC/<< parameters.version >>/dev/docker_data/default_pipeline.yml || true
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run-cpac-commands:
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steps:
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- setup_remote_docker

β€Ždocs/_sources/_static/params/afterwarp_config.csvβ€Ž

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β€Ždocs/_sources/_static/params/alff_config.csvβ€Ž

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β€Ždocs/_sources/_static/params/anat_config.csvβ€Ž

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β€Ždocs/_sources/_static/params/centrality_config.csvβ€Ž

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β€Ždocs/_sources/_static/params/compute_config.csvβ€Ž

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β€Ždocs/_sources/_static/params/data_config.csvβ€Ž

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β€Ždocs/_sources/_static/params/fmap_distcorr_config.csvβ€Ž

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β€Ždocs/_sources/_static/params/fta_config.csvβ€Ž

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β€Ždocs/_sources/_static/params/fte_config.csvβ€Ž

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