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📝 Document keys that need manual update for 1.7→1.8
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docs/_sources/user/1.7-1.8-nesting-mappings.rst

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@@ -20,6 +20,27 @@ The following YAML is formatted such that the keys are the pipeline configuratio
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pipeline_setup:
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pipeline_name: pipeline-name_value
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The following keys are deprecated:
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* ``TR``
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* ``fdCalc``
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* ``reGenerateOutputs``
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* ``runMedianAngleCorrection``
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* ``slice_timing_pattern``
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* ``targetAngleDeg``
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* ``runSymbolicLinks``
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See :ref:`Regressors specification <nuisance-no-gui>` to manually update any of the following keys:
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* ``nComponents``
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* ``nuisanceBandpassFreq``
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* ``numRemovePrecedingFrames``
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* ``numRemoveSubsequentFrames``
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* ``runFrequencyFiltering``
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* ``runFristonModel``
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* ``runMotionSpike``
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* ``spikeThreshold``
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The full list of mappings is as follows:
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.. literalinclude:: /references/1.7-1.8-nesting-mappings.yml

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