The email templates at https://github.com/FusionAuth/fusionauth-example-kickstart/tree/main/fusionauth/emails do not include a template for two factor authentication.
The templates should be added to the folder above, along with updating the example Kickstart JSON file at https://github.com/FusionAuth/fusionauth-example-kickstart/blob/main/fusionauth/kickstart-development.json to use them.