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[test/versionConv int] Add json test
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‎test/resources/version_conversion_int.json‎

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{
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"Document": {
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"repository": "http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml",
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"version": "v1.13",
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"date": "2018-02-02",
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"sections": [
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{
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"definition": "def s1",
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"name": "sec_one",
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"include": "url s1",
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"properties": [
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{
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"definition": "def prop1",
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"values": [
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{
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"dtype": "string"
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},
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{
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"uncertainty": 11,
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"unit": "arbitrary",
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"definition": "def val 1",
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"value": "'1'",
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"reference": "ref val 1",
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"dtype": "string",
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"filename": "filename val 1"
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},
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{
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"uncertainty": 12,
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"unit": "arbitrary 2",
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"definition": "def val 1",
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"value": "2",
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"reference": "ref val 1",
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"dtype": "int",
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"filename": "filename val 1"
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},
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{
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"uncertainty": 13,
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"unit": "arbitrary 3",
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"definition": "def val 3",
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"value": "'3'",
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"reference": "ref val 3",
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"dtype": "string",
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"filename": "filename val 3"
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}
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],
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"name": "prop_one",
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"dependency_value": "dep val p1",
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"dependency": "dep p1"
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},
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{
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"definition": "def prop2",
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"values": [
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{
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"dtype": "string"
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},
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{
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"uncertainty": 12,
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"unit": "arbitrary",
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"definition": "def val 1",
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"value": "1",
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"reference": "ref val 1",
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"dtype": "int",
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"filename": "filename val 1"
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},
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{
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"uncertainty": 12,
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"unit": "arbitrary",
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"definition": "def val 1",
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"value": "2",
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"reference": "ref val 1",
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"dtype": "int",
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"filename": "filename val 1"
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},
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{
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"uncertainty": 12,
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"unit": "arbitrary",
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"definition": "def val 1",
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"value": "3",
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"reference": "ref val 1",
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"dtype": "int",
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"filename": "filename val 1"
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},
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{
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"uncertainty": 12,
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"unit": "arbitrary",
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"definition": "def val 1",
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"value": "4",
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"reference": "ref val 1",
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"dtype": "int",
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"filename": "filename val 1"
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},
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{
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"uncertainty": 12,
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"unit": "arbitrary",
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"definition": "def val 1",
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"value": "4",
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"reference": "ref val 1",
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"dtype": "int",
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"filename": "filename val 1"
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},
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{
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"uncertainty": 12,
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"unit": "arbitrary",
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"definition": "def val 1",
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"value": "4",
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"reference": "ref val 1",
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"dtype": "int",
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"filename": "filename val 1"
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},
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{
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"uncertainty": 12,
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"unit": "arbitrary",
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"definition": "def val 1",
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"value": "4",
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"reference": "ref val 1",
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"dtype": "int",
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"filename": "filename val 1"
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},
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{
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"uncertainty": 12,
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"unit": "arbitrary",
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"definition": "def val 1",
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"value": "4",
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"reference": "ref val 1",
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"dtype": "int",
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"filename": "filename val 1"
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}
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],
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"name": "prop_two",
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"dependency_value": "dep val p2",
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"dependency": "dep p2"
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},
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{
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"definition": "def prop3",
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"values": [
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{
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"dtype": "string"
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}
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],
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"name": "prop_three",
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"dependency_value": "dep val p3",
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"dependency": "dep p3"
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}
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],
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"sections": [
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{
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"definition": "def subs1",
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"name": "subsection one",
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"include": "url subs1",
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"properties": [
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{
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"definition": "def prop1",
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"values": [
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{
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"dtype": "string"
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}
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],
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"name": "prop one",
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"dependency_value": "dep val p1",
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"dependency": "dep p1"
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},
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{
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"definition": "def prop3",
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"values": [
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{
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"dtype": "string"
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},
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{
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"uncertainty": 12,
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"unit": "arbitrary",
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"definition": "def val 1",
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"value": "4",
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"reference": "ref val 1",
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"dtype": "int",
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"filename": "filename val 1"
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},
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{
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"uncertainty": 12,
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"unit": "arbitrary",
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"definition": "def val 1",
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"value": "4",
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"reference": "ref val 1",
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"dtype": "int",
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"filename": "filename val 1"
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},
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{
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"uncertainty": 12,
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"unit": "arbitrary",
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"definition": "def val 1",
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"value": "4",
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"reference": "ref val 1",
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"dtype": "int",
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"filename": "filename val 1"
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},
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{
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"uncertainty": 12,
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"unit": "arbitrary",
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"definition": "def val 1",
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"value": "2",
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"reference": "ref val 1",
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"dtype": "int",
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"filename": "filename val 1"
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}
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],
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"name": "prop three",
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"dependency_value": "dep val p3",
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"dependency": "dep p3"
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},
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{
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"definition": "def prop2",
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"values": [
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{
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"dtype": "string"
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}
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],
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"name": "prop two",
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"dependency_value": "dep val p2",
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"dependency": "dep p2"
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}
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],
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"sections": [],
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"type": "subsec",
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"link": "somewhere subs1",
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"reference": "ref subs1"
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}
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],
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"type": "mainsec",
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"link": "somewhere s1",
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"reference": "ref s1"
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},
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{
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"definition": "def s2",
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"name": "section two",
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"include": "url s2",
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"properties": [],
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"sections": [],
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"type": "mainsec",
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"link": "somewhere s2",
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"reference": "ref s2"
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},
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{
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"definition": "def s3",
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"name": "section three",
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"include": "http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml",
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"properties": [],
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"sections": [],
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"type": "mainsec",
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"link": "somewhere s3",
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"reference": "ref s3"
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}
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],
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"author": "author"
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},
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"odml-version": "1"
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}

‎test/test_version_converter_integration.py‎

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# Set up test environment
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dir_path = os.path.dirname(os.path.realpath(__file__))
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self.jsonfile = os.path.join(dir_path, "resources", "version_conversion_int.json")
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self.xmlfile = os.path.join(dir_path, "resources", "version_conversion_int.xml")
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self.yamlfile = os.path.join(dir_path, "resources", "version_conversion_int.yaml")
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prop = sec.properties["prop_three"]
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self.assertEqual(len(prop.value), 0)
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def test_convert_json(self):
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with self.assertRaises(Exception):
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VC(self.jsonfile).write_to_file(self.outfile)
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VC(self.jsonfile).write_to_file(self.outfile, "JSON")
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self.assertTrue(os.path.exists(self.outfile))
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doc = load(self.outfile)
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# Test document attribute export
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self.assertEqual(doc.author, "author")
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self.assertEqual(doc.version, "v1.13")
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repo = "http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml"
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self.assertEqual(doc.repository, repo)
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self.assertEqual(len(doc.sections), 3)
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sec = doc.sections["sec_one"]
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self.assertEqual(sec.definition, "def s1")
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self.assertEqual(sec.reference, "ref s1")
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self.assertEqual(sec.type, "mainsec")
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self.assertEqual(len(sec.sections), 1)
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self.assertEqual(len(sec.properties), 3)
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prop = sec.properties["prop_one"]
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self.assertEqual(prop.definition, "def prop1")
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self.assertEqual(prop.dependency, "dep p1")
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self.assertEqual(prop.dependency_value, "dep val p1")
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self.assertEqual(prop.reference, "ref val 1")
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self.assertEqual(prop.uncertainty, "11")
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self.assertEqual(prop.unit, "arbitrary")
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self.assertEqual(prop.value_origin, "filename val 1")
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self.assertEqual(prop.dtype, "string")
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self.assertEqual(len(prop.value), 3)
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prop = sec.properties["prop_two"]
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self.assertEqual(len(prop.value), 8)
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prop = sec.properties["prop_three"]
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self.assertEqual(len(prop.value), 0)

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