Merge pull request #90 from boshek/master

Small cosmetic changes to documentation

Author: lawinslow

.Rbuildignore

@@ -4,6 +4,5 @@ changelog.txt
 ^.*\.Rproj$
 ^\.Rproj\.user$
 README.md
-
 ^README\.Rmd$
-^README-.*\.png$
+

.gitignore

@@ -1,5 +1,5 @@
 .Rproj.user
 .Rhistory
 .RData
-*.Rproj
+
 

NEWS.md

@@ -6,8 +6,6 @@
 * Add split and merge vignette
 
 # rLakeAnalyzer 1.10.0
-
-
 * Added split and merge algorithm to package which enable auto detection of clines (e.g thermoclines)
 
 

README-example-1.png

@@ -8,11 +8,12 @@ output: github_document
 knitr::opts_chunk$set(
   collapse = TRUE,
   comment = "#>",
-  fig.path = "README-"
+  fig.path = "tools/readme/README-"
 )
 ```
 
 [![Build Status](https://travis-ci.org/GLEON/rLakeAnalyzer.svg?branch=master)](https://travis-ci.org/GLEON/rLakeAnalyzer)
+[![CRAN\_Status\_Badge](http://www.r-pkg.org/badges/version/rLakeAnalyzer)](https://cran.r-project.org/package=rLakeAnalyzer) 
 [![Download Count](http://cranlogs.r-pkg.org/badges/rLakeAnalyzer)]( https://cran.r-project.org/web/packages/rLakeAnalyzer/index.html)
 [![DOI](https://zenodo.org/badge/23404/GLEON/rLakeAnalyzer.svg)](https://zenodo.org/badge/latestdoi/23404/GLEON/rLakeAnalyzer)
 

README-example-2.png

@@ -1,6 +1,6 @@
 
 <!-- README.md is generated from README.Rmd. Please edit that file -->
-[![Build Status](https://travis-ci.org/GLEON/rLakeAnalyzer.svg?branch=master)](https://travis-ci.org/GLEON/rLakeAnalyzer) [![Download Count](http://cranlogs.r-pkg.org/badges/rLakeAnalyzer)](https://cran.r-project.org/web/packages/rLakeAnalyzer/index.html) [![DOI](https://zenodo.org/badge/23404/GLEON/rLakeAnalyzer.svg)](https://zenodo.org/badge/latestdoi/23404/GLEON/rLakeAnalyzer)
+[![Build Status](https://travis-ci.org/GLEON/rLakeAnalyzer.svg?branch=master)](https://travis-ci.org/GLEON/rLakeAnalyzer) [![CRAN\_Status\_Badge](http://www.r-pkg.org/badges/version/rLakeAnalyzer)](https://cran.r-project.org/package=rLakeAnalyzer) [![Download Count](http://cranlogs.r-pkg.org/badges/rLakeAnalyzer)](https://cran.r-project.org/web/packages/rLakeAnalyzer/index.html) [![DOI](https://zenodo.org/badge/23404/GLEON/rLakeAnalyzer.svg)](https://zenodo.org/badge/latestdoi/23404/GLEON/rLakeAnalyzer)
 
 rLakeAnalyzer
 =============
@@ -30,6 +30,7 @@ First the package must be loaded into R:
 
 ``` r
 library(rLakeAnalyzer)
+#> Warning: package 'rLakeAnalyzer' was built under R version 3.4.3
 ```
 
 You can view a list of functions available in rLakeAnalyzer with:
@@ -51,15 +52,15 @@ sp.wtr = load.ts(wtr.path)
 wtr.heat.map(sp.wtr)
 ```
 
-![](README-example-1.png)
+![](tools/readme/README-example-1.png)
 
 ``` r
 
 #Change defaults supplied to filled.contour
 wtr.heat.map(sp.wtr, zlim=c(0,15), plot.title="Sparkling Water Temp (C)")
 ```
 
-![](README-example-2.png)
+![](tools/readme/README-example-2.png)
 
 Getting Help or Reporting an Issue
 ----------------------------------

README.Rmd

@@ -0,0 +1,17 @@
+Version: 1.0
+
+RestoreWorkspace: Default
+SaveWorkspace: Default
+AlwaysSaveHistory: Default
+
+EnableCodeIndexing: Yes
+UseSpacesForTab: Yes
+NumSpacesForTab: 2
+Encoding: UTF-8
+
+RnwWeave: Sweave
+LaTeX: pdfLaTeX
+
+BuildType: Package
+PackageUseDevtools: Yes
+PackageInstallArgs: --no-multiarch --with-keep.source