add images and thumbnails to pages

Author: tony-kuo

docs/conf.py

@@ -55,8 +55,8 @@
 # nbsphinx configuration
 # nbsphinx_allow_errors = True
 nbsphinx_thumbnails = {
-    #'notebooks/1. Querying Attributions (MS1 signature)': '_static/query_thumbnail_1.png',
-    #'notebooks/2. Generating Attributions': '_static/generate_thumbnail_1.png',
+    'notebooks/1. Querying Attributions': '_static/query_thumbnail.png',
+    'notebooks/2. Generating Attributions': '_static/generate_thumbnail.png',
 }
 
 # Add any paths that contain templates here, relative to this directory.

docs/index.rst

@@ -21,6 +21,10 @@ collection of gene attributions.
 Attribution scores can be used for rapid gene signature scoring across database
 of 22 million single cell transcriptomes.
 
+.. image:: _static/overview_image.png
+    :width: 75%
+    :align: center
+
 Capabilities
 --------------------------------------------------------------------------------
 
@@ -29,11 +33,19 @@ Query Attributions
 
 :mod:`signature.signature` provides tools to query attributions across dozens of cell types from hundreds of studies.
 
+.. image:: _static/query_image.png
+    :width: 75%
+    :align: center
+
 Generate attributions
 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
 
 :mod:`signature.signature` also provides tools to generate attribution scores on new data that can be integrated with out existing scores.
 
+.. image:: _static/generate_image.png
+    :width: 75%
+    :align: center
+
 Indices
 --------------------------------------------------------------------------------
 

docs/tutorials.rst

@@ -5,5 +5,5 @@ Tutorials
 
 .. nbgallery::
 
-    Querying Attributions <notebooks/1. Querying Attributions.ipynb>
-    Generating Attributions <notebooks/2. Generating Attributions.ipynb>
+    Querying Attributions <notebooks/1. Querying Attributions>
+    Generating Attributions <notebooks/2. Generating Attributions>