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build: use updated maturin release workflow
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‎.github/workflows/release.yaml‎

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# This file is autogenerated by maturin v1.2.3
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# To update, run
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#
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# maturin generate-ci github
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#
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# Edited to incorporate genomicmedlab/software-templates Python template
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# See also https://www.maturin.rs/distribution#using-pypis-trusted-publishing
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name: Publish Python distribution to PyPI
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on:
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release:
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types: [created]
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push:
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branches:
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- main
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tags:
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- '*'
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pull_request:
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workflow_dispatch:
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permissions:
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contents: read
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jobs:
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linux:
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runs-on: ubuntu-latest
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runs-on: ${{ matrix.platform.runner }}
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strategy:
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matrix:
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target: [x86_64, x86, aarch64, armv7, s390x, ppc64le]
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platform:
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- runner: ubuntu-22.04
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target: x86_64
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- runner: ubuntu-22.04
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target: x86
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- runner: ubuntu-22.04
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target: aarch64
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- runner: ubuntu-22.04
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target: armv7
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- runner: ubuntu-22.04
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target: s390x
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- runner: ubuntu-22.04
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target: ppc64le
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steps:
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- uses: actions/checkout@v4
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- uses: actions/setup-python@v5
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with:
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python-version: '3.10'
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python-version: 3.x
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- name: Build wheels
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uses: PyO3/maturin-action@v1
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with:
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target: ${{ matrix.target }}
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args: --release --out dist --find-interpreter
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target: ${{ matrix.platform.target }}
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args: --release --out dist --manifest-path rust/Cargo.toml
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sccache: 'true'
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manylinux: auto
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- name: Build free-threaded wheels
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uses: PyO3/maturin-action@v1
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with:
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target: ${{ matrix.platform.target }}
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args: --release --out dist --manifest-path rust/Cargo.toml -i python3.13t
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sccache: 'true'
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manylinux: auto
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- name: Upload wheels
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uses: actions/upload-artifact@v4
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with:
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name: wheels
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name: wheels-linux-${{ matrix.platform.target }}
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path: dist
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musllinux:
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runs-on: ${{ matrix.platform.runner }}
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strategy:
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matrix:
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platform:
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- runner: ubuntu-22.04
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target: x86_64
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- runner: ubuntu-22.04
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target: x86
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- runner: ubuntu-22.04
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target: aarch64
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- runner: ubuntu-22.04
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target: armv7
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steps:
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- uses: actions/checkout@v4
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- uses: actions/setup-python@v5
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with:
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python-version: 3.x
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- name: Build wheels
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uses: PyO3/maturin-action@v1
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with:
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target: ${{ matrix.platform.target }}
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args: --release --out dist --manifest-path rust/Cargo.toml
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sccache: 'true'
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manylinux: musllinux_1_2
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- name: Build free-threaded wheels
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uses: PyO3/maturin-action@v1
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with:
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target: ${{ matrix.platform.target }}
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args: --release --out dist --manifest-path rust/Cargo.toml -i python3.13t
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sccache: 'true'
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manylinux: musllinux_1_2
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- name: Upload wheels
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uses: actions/upload-artifact@v4
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with:
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name: wheels-musllinux-${{ matrix.platform.target }}
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path: dist
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windows:
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runs-on: windows-latest
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runs-on: ${{ matrix.platform.runner }}
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strategy:
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matrix:
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target: [x64, x86]
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platform:
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- runner: windows-latest
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target: x64
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- runner: windows-latest
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target: x86
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steps:
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- uses: actions/checkout@v4
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- uses: actions/setup-python@v5
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with:
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python-version: '3.10'
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architecture: ${{ matrix.target }}
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python-version: 3.x
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architecture: ${{ matrix.platform.target }}
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- name: Build wheels
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uses: PyO3/maturin-action@v1
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with:
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target: ${{ matrix.target }}
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args: --release --out dist --find-interpreter
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target: ${{ matrix.platform.target }}
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args: --release --out dist --manifest-path rust/Cargo.toml
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sccache: 'true'
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- name: Build free-threaded wheels
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uses: PyO3/maturin-action@v1
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with:
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target: ${{ matrix.platform.target }}
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args: --release --out dist --manifest-path rust/Cargo.toml -i python3.13t
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sccache: 'true'
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- name: Upload wheels
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uses: actions/upload-artifact@v4
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with:
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name: wheels
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name: wheels-windows-${{ matrix.platform.target }}
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path: dist
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macos:
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runs-on: macos-latest
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runs-on: ${{ matrix.platform.runner }}
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strategy:
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matrix:
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target: [x86_64, aarch64]
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platform:
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- runner: macos-13
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target: x86_64
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- runner: macos-14
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target: aarch64
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steps:
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- uses: actions/checkout@v4
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- uses: actions/setup-python@v5
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with:
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python-version: '3.10'
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python-version: 3.x
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- name: Build wheels
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uses: PyO3/maturin-action@v1
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with:
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target: ${{ matrix.target }}
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args: --release --out dist --find-interpreter
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target: ${{ matrix.platform.target }}
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args: --release --out dist --manifest-path rust/Cargo.toml
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sccache: 'true'
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- name: Build free-threaded wheels
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uses: PyO3/maturin-action@v1
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with:
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target: ${{ matrix.platform.target }}
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args: --release --out dist --manifest-path rust/Cargo.toml -i python3.13t
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sccache: 'true'
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- name: Upload wheels
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uses: actions/upload-artifact@v4
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with:
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name: wheels
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name: wheels-macos-${{ matrix.platform.target }}
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path: dist
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sdist:
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uses: PyO3/maturin-action@v1
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with:
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command: sdist
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args: --out dist
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args: --out dist --manifest-path rust/Cargo.toml
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- name: Upload sdist
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uses: actions/upload-artifact@v4
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with:
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name: wheels
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name: wheels-sdist
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path: dist
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release:
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name: Release
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runs-on: ubuntu-latest
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if: ${{ startsWith(github.ref, 'refs/tags/') }}
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needs: [
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linux,
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musllinux,
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windows,
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macos,
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sdist
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]
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environment:
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name: pypi
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url: https://pypi.org/p/agct
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url: https://pypi.org/p/vrsix
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permissions:
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id-token: write # IMPORTANT: mandatory for trusted publishing
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if: "startsWith(github.ref, 'refs/tags/')"
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needs: [linux, windows, macos, sdist]
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id-token: write
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contents: write
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attestations: write
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steps:
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- uses: actions/download-artifact@v4
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- name: Acquire build artifacts from parent jobs
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uses: actions/download-artifact@v4
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- name: Generate artifact attestation
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uses: actions/attest-build-provenance@v1
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with:
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name: wheels
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subject-path: 'wheels-*/*'
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- name: Publish to PyPI
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uses: PyO3/maturin-action@v1
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with:
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command: upload
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args: --non-interactive --skip-existing *
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args: --non-interactive --skip-existing wheels-*/*

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