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model.py
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199 lines (180 loc) · 9.08 KB
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import config
from module import *
from torch.nn import CrossEntropyLoss, MSELoss
class LogEntityLogAggregationLayer(nn.Module):
def __init__(self, embedding_dim=300, hidden_size=128, num_layers=2, atten_size=32,
bidrectional=True, multi_head=2, use_lstm=False, use_gat=True):
super(LogEntityLogAggregationLayer, self).__init__()
self.embedding_dim = embedding_dim
self.graph_atten_layer = GraphAttentionLayer(embedding_dim, atten_size) if use_gat==True else EmptyLayer()
self.model_type = nn.LSTM if use_lstm==True else nn.GRU
self.multi_head = multi_head
self.seq_model = self.model_type(self.embedding_dim,
hidden_size,
num_layers,
bidirectional=bidrectional,
batch_first=True)
def forward(self, log_repr, log_adj_matrices):
log_repr = self.graph_atten_layer.forward(log_repr, log_adj_matrices)
output, _ = self.seq_model(log_repr)
att_log_reprs = output[:, -1, :]
return att_log_reprs
class LogEntityLogTransformerLayer(nn.Module):
def __init__(self, embedding_dim=300, hidden_size=128, num_layers=2, atten_size=32,
bidrectional=True, multi_head=2, use_lstm=False, use_gat=True):
super(LogEntityLogTransformerLayer, self).__init__()
self.embedding_dim = embedding_dim
self.graph_atten_layer = GraphAttentionLayer(embedding_dim, atten_size) if use_gat==True else EmptyLayer()
self.model_type = nn.LSTM if use_lstm==True else nn.GRU
self.multi_head = multi_head
self.bidrection_coef = 2 if bidrectional==True else 1
self.transformer_block = nn.TransformerEncoderLayer(
d_model=self.embedding_dim,
nhead=multi_head,
dim_feedforward=256,
batch_first=True,
dropout=0.1)
self.dense = nn.Linear(self.embedding_dim, hidden_size*self.bidrection_coef)
self.activate_func = nn.ELU()
def forward(self, log_repr, log_adj_matrices):
log_repr = self.graph_atten_layer.forward(log_repr, log_adj_matrices)
output = self.transformer_block(log_repr).mean(dim=1)
output = self.activate_func(output)
att_log_reprs = self.activate_func(self.dense(output))
return att_log_reprs
class EntityLogEntityAggregationLayer(nn.Module):
def __init__(self, embedding_dim=300, hidden_size=128, atten_size=32, bidrection_coef=2, use_gat=True):
super(EntityLogEntityAggregationLayer, self).__init__()
self.atten_size = atten_size
self.hidden_size = hidden_size
self.bidrection_coef = bidrection_coef
self.graph_atten_layer = GraphAttentionLayer(embedding_dim, atten_size) if use_gat==True else EmptyLayer()
self.atten_layer = SelfAttentionLayer(embedding_dim, self.bidrection_coef*hidden_size)
def forward(self, entity_reprs, adjacency_matrices):
agg_entity_reprs = self.graph_atten_layer.forward(entity_reprs, adjacency_matrices, return_list=True)
all_attenion_score = []
attention_entity_reprs = torch.FloatTensor(len(entity_reprs), self.bidrection_coef*self.hidden_size).fill_(0)
for i, (ent_repr, agg_ent_repr) in enumerate(zip(entity_reprs, agg_entity_reprs)):
if ent_repr.shape[0]==0:
all_attenion_score.append([])
continue
att_entity_repr_, attenion_score = self.atten_layer(agg_ent_repr)
attention_entity_reprs[i] = att_entity_repr_
all_attenion_score.append(attenion_score)
return attention_entity_reprs, all_attenion_score
class SemanticAggregationLayer(nn.Module):
def __init__(self, hidden_size, bidrection_coef, use_meta_path=[True, True]):
super(SemanticAggregationLayer, self).__init__()
self.num_meta_path = sum([1 if flag==True else 0 for flag in use_meta_path])
self.output_dim = hidden_size*bidrection_coef*self.num_meta_path
def forward(self, att_log_reprs=None, att_entity_reprs=None):
if att_log_reprs is None:
semantic_agg = att_entity_reprs
elif att_entity_reprs is None:
semantic_agg = att_log_reprs
else:
semantic_agg = torch.cat((att_log_reprs, att_entity_reprs), axis=1)
return semantic_agg
class LographEmbeddingLayer(nn.Module):
def __init__(self, log_entity_graph=None, embed_layer=None, template_cache=None, use_meta_path=[True,True]):
super(LographEmbeddingLayer, self).__init__()
self.log_entity_graph = log_entity_graph
self.embed_layer = embed_layer
self.template_cache = template_cache
self.embedding_dim = embed_layer.embedding_dim
self.use_log_repr = use_meta_path[0]
self.use_ent_repr = use_meta_path[1]
def generate_entity_embed_and_adj_matrix(self, indice):
l2e_map, e2l_map, entity_tmpl_map = self.log_entity_graph.fetch_subgraph(indice)
ent_list = list(entity_tmpl_map.keys())
ent2id = {x:i for i,x in enumerate(ent_list)}
num_ent = len(ent2id)
adjacency_matrix = np.eye(num_ent)
for i, u in enumerate(ent_list):
for l in e2l_map[u]:
for v in l2e_map[l]:
j = ent2id[v]
adjacency_matrix[i, j] += 1
ent_repr = []
for ent_id in entity_tmpl_map:
avg_repr = np.zeros(self.embedding_dim, dtype=float)
for k in entity_tmpl_map[ent_id]:
tmpl_repr = self.template_cache.get_template_repr(k)
avg_repr += tmpl_repr
avg_repr /= max(len(entity_tmpl_map[ent_id]), 1)
ent_repr.append(avg_repr.tolist())
return ent_repr, adjacency_matrix, ent_list
def generate_adjacency_matrix(self, indice):
l2e_map, e2l_map, entity_tmpl_map = self.log_entity_graph.fetch_subgraph(indice)
log2id = {x:i for i,x in enumerate(indice)}
seq_len = len(indice)
adjacency_matrix = np.eye(seq_len)
for i, u in enumerate(indice):
for e in l2e_map[u]:
for v in e2l_map[e]:
j = log2id[v]
adjacency_matrix[i, j] += 1
return adjacency_matrix
def forward(self, inputs):
words, labels, groups, masks, indices = inputs[:5]
if self.use_log_repr==True:
log_repr, labels = self.embed_layer(inputs)
log_adj_matrices = []
for i, indice in enumerate(indices):
adj_matrix = self.generate_adjacency_matrix(indice)
log_adj_matrices.append(torch.FloatTensor(adj_matrix))
else:
log_repr, log_adj_matrices = None, None
if self.use_ent_repr==True:
entity_reprs, ent_adj_matrices, ent_indices = [], [], []
for i, indice in enumerate(indices):
ent_repr, adj_matrix, ent_index = self.generate_entity_embed_and_adj_matrix(indice)
ent_adj_matrices.append(torch.FloatTensor(adj_matrix))
ent_repr = torch.FloatTensor(ent_repr)
entity_reprs.append(ent_repr)
ent_indices.append(ent_index)
else:
entity_reprs, ent_adj_matrices, ent_indices = None, None, None
return log_repr, log_adj_matrices, entity_reprs, ent_adj_matrices, ent_indices
def fetch_entity_names(self, ent_indices):
entity_names = []
for ent_batch in ent_indices:
entity_names.append([self.log_entity_graph.get_entity_name(e_id) for e_id in ent_batch])
return entity_names
class Lograph(PyTorchModule):
def __init__(self, log_entity_graph=None, embed_layer=None, template_cache=None, hidden_size=100, atten_size=16,
num_layers=2, bidrectional=True, use_meta_path=[True,True], alias=""):
super(Lograph, self).__init__()
self.hidden_size = hidden_size
self.num_layers = num_layers
self.bidrection_coef = 2 if bidrectional==True else 1
self.embedding_dim = embed_layer.embedding_dim
self.lograph_embed_layer = LographEmbeddingLayer(log_entity_graph, embed_layer, template_cache, use_meta_path)
LogLayerModel = LogEntityLogTransformerLayer if config.use_transformer==True else LogEntityLogAggregationLayer
self.log_entity_log_layer = LogLayerModel(self.embedding_dim, hidden_size, num_layers, atten_size,
bidrectional, use_lstm=config.use_lstm_layer, use_gat=config.use_gat_layer) if use_meta_path[0]==True else EmptyLayer()
self.entity_log_entity_layer = EntityLogEntityAggregationLayer(self.embedding_dim, hidden_size, atten_size,
self.bidrection_coef, use_gat=config.use_gat_layer) if use_meta_path[1]==True else EmptyLayer(1)
self.semantic_agg_layer = SemanticAggregationLayer(hidden_size, self.bidrection_coef, use_meta_path)
self.classifier = nn.Linear(self.semantic_agg_layer.output_dim, 2)
self.set_model_name("Lograph@%s"%(alias))
self.loss_func = CrossEntropyLoss(reduction="mean")
self.task = "binary_class"
def forward(self, inputs):
log_repr, log_adjmtx, entity_repr, ent_adjmtx, ent_indices = self.lograph_embed_layer(inputs)
att_log_reprs = self.log_entity_log_layer(log_repr, log_adjmtx)
att_entity_reprs, all_att_score = self.entity_log_entity_layer(entity_repr, ent_adjmtx)
agg_reprs = self.semantic_agg_layer(att_log_reprs, att_entity_reprs)
output = self.classifier(agg_reprs)
proba = softmax(output, dim=1)
return proba
def collect_atten_score(self, inputs):
words, labels, groups, masks, indices = inputs[:5]
log_repr, log_adjmtx, entity_repr, ent_adjmtx, ent_indices = self.lograph_embed_layer(inputs)
att_log_reprs = self.log_entity_log_layer(log_repr, log_adjmtx)
att_entity_reprs, all_att_score = self.entity_log_entity_layer(entity_repr, ent_adjmtx)
entity_names = self.lograph_embed_layer.fetch_entity_names(ent_indices)
agg_reprs = self.semantic_agg_layer(att_log_reprs, att_entity_reprs)
output = self.classifier(agg_reprs)
proba = softmax(output, dim=1)
return proba, labels, entity_names, all_att_score