What's the best way to create a cell by gene dataframe? #1069
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wshands
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I'm not sure I understand your question but it sounds like you just want to manipulate SummarizedExperiments and I'd recommend googling around for your answer. |
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I'm a bit unfamiliar with R and ArchR and I'd like to create a data frame with rows that match a cell name to gene information, e.g.
seqnames start end strand (gene)name idx
Where myGeneScoreMatrix <- getMatrixFromProject(proj) and the cell name from colData(myGeneScoreMatrix) and the gene information from rowData(myGeneScoreMatrix). What's the best way to do that?
Thanks!
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