Processing mixed species samples #1416
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prmunn
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I would not recommend trying to analyze these together. You could do as you propose but this is not an intended use case of ArchR and I imagine it would be an uphill battle. |
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Indeed. I'll analyze them separately. |
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I have samples comprised of both human and mouse cells from a mixed species (barnyard) experiment. Is it possible to set up a gene annotation file (using makeTxDbFromEnsembl and createGeneAnnotation) or would I have to analyze them separately (once using hg38 and again using mm10)?
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