how to get differential peaks containing a specific motif #2037
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ksr2018
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Hi again, @rcorces @jgranja24 - could you please help me out with the above question? Thank you! |
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Hello,
I would like to get peak coordinate information (such as chr, start, end) for peaks that contain a specific transcription factor motif.
I have seen few other discussion/issues that have asked similar questions and the solution involves subsetting the seMarker. But I cannot figure out how to do that. Can someone please help with the exact code to do this?
I have run the following code. After this, how can I find which peaks in markerTest_C3vsC2 contain motifs for a specific TF such as GATA4?
Thank you in advance!
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