addGroupCoverages based on each single cell #2143
Unanswered
travilucas
asked this question in
Questions / Documentation
Replies: 0 comments
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Uh oh!
There was an error while loading. Please reload this page.
-
Can

addGroupCoverages
be added based on each cell when creating pseudobulk data, because in our project, each cell is considered to be an independent individual that needs to be analyzed. I don't know if this is correct, because the peakset must be added throughaddGroupCoverages
before subsequent calculations can be performed such as adding peakMatrix and calculating Motif deviations. Additionally, I wonder if the ChromVAR software that identifies TF-motif binding strengths cell by cell will have some bias in the grouping based on addGroupCoverages?Beta Was this translation helpful? Give feedback.
All reactions