Obtaining enriched motif result for each peak #2189
Unanswered
yuyuliu
asked this question in
Questions / Documentation
Replies: 0 comments
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Uh oh!
There was an error while loading. Please reload this page.
-
I'm analyzing scATAC-seq data by following their official manual.
In the section "12.1 Motif Enrichment in Differential Peaks", I obtained good results comparing the motif enrichment of differential peaks between two samples for a same cluster of cells.
Now, I want to know which peaks were assigned for enrichment of the significant TFs in my results. Is it possible to do that?
I looked into the results returned by peakAnnoEnrichment, but it only contained TFs, p-values and the number of background peaks, etc.
Beta Was this translation helpful? Give feedback.
All reactions