genes in the corresponding k means cluster in P2G Heatmaps

[sylestiel]

In order to show a few representative genes corresponding to each k mean cluster in the heatmap of peak-to-gene links how can it be achieved? So far I have been able to obtain the following values.

seqnames	start	end	width	strand	value	FDR

Although I can annotate the regions to get the corresponding gene name I do not know which ones correspond to the appropriate k mean generated cluster.

Any thoughts?

[rcorces]

Does this help? #132

The returnMatrices parameter should give you what you want:
https://www.archrproject.com/reference/plotPeak2GeneHeatmap.html

[sylestiel]

Thank you @ rcorces. It did.

[sylestiel]

@rohitrrj

FYI check out the comment from rcorces about finding the kmeans Id corresponding to the P2G links.

Hope it helps you too!