How I use plotMarkerHeatmap function to get the heatmap of genes from called peaks? #762
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MaryGoAround
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Sorry for not answering this sooner but this issue came up with another user and we were able to identify the problem. |
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Hello
I am trying to plot peaks called by macs2 but likely in the rownames of markersPeaks there is no gene name to plot and all are numbers
[ArchR-plotMarkerHeatmap-736c57d5033a-Date-2021-05-17_Time-12-41-55.log](https://github.com/GreenleafLab/ArchR/files/6493575/ArchR-plotMarkerHeatmap-736c57d5033a-Date-2021-05-17_Time-12-41-55.log)
draw(heatmapPeaks, heatmap_legend_side = "bot", annotation_legend_side = "bot") Error in (function (classes, fdef, mtable) : unable to find an inherited method for function ‘draw’ for signature ‘"list"’
I have attached my log file please can you have a look
Can anyone help me to know what I should add/adjust to get a heatmap by this function?
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