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HDF5 Testing Framework

nbagha1 edited this page Aug 28, 2025 · 8 revisions

HDF5 Testing Framework? Guidelines?

Objectives

  • Regression Testing: Verify that updates, bug fixes, or enhancements to the HDF5 library maintain compatibility with previous versions and do not alter the expected behavior of existing features, APIs, or data formats.
  • Performance Evaluation: Evaluate the efficiency, scalability, and reliability of HDF5 operations under various workloads:

Key Areas

Regression Testing:

  • Installation and setup
  • API & Functional testing
  • Compatibility testing:
    • Backward compatibility with File Format
    • Backward compatibility with library versions (version functions tested via GitHub)
  • Platforms & Compilers

Performance Evaluation:

  • Read/write throughput
  • Latency
  • Memory usage (Currently not monitored)
  • I/O patterns across different configurations and environments

Environment Setup

Set up a controlled testing environment that reflects the target deployment scenario:

  • Hardware specifications (CPU, RAM, storage type)
  • Operating system and file system details
  • HDF5 library version and configuration
  • Network setup for distributed or parallel I/O testing

Recommended Tools and Utilities

  • HDF5 command-line utilities: h5perf, h5dump, h5stat
  • Custom benchmarking scripts using h5py or C APIs
    • Other benchmarks to be determined later
  • H5Bench suite:
    • Simulates common HDF5 usage patterns
    • Supports parallel I/O
    • Evaluates I/O overhead and observed I/O rate
    • Includes patterns for synchronous/asynchronous operations, caching, logging, and metadata stress
    • GitHub
    • Documentation
  • Profiling tools: Grafana
  • Monitoring tools: CDash (optional)

Testing Metrics

Regression Testing (Lead: Larry Knox)

  • NOTE: It is the responsibility of the test authors to address these metrics, testing only verifies pass or fail on various configurations. | Metric | Description | |--------|-------------| |Backward Compatibility | Ensure older HDF5 files can still be read and written correctly | |API Stability | Confirm that public APIs behave consistently across versions | |Data Integrity | Validate that data stored and retrieved remains unchanged | |Performance Consistency | Detect any regressions in read/write performance | |Cross-Platform Consistency | Ensure consistent behavior across supported platforms and compilers | |Error Handling | Confirm that known error conditions are still handled correctly |

Performance Testing (Lead: Joe Lee)

  • NOTE: It is the responsibility of the test authors to address these metrics, testing only verifies pass or fail on various configurations. | Metric | Description | |--------|-------------| | Throughput Measurement | Assess read/write speeds for different dataset sizes and access patterns | | File Size and Layout | Compare performance between contiguous and chunked layouts | | Chunking Strategies | Evaluate impact of chunk sizes and compression methods | | Parallel I/O | Test performance with MPI-enabled HDF5 and scalability | | Metadata Access | Measure time to read/write attributes and nested group structures | | Dataset Access Patterns | Benchmark selection methods and data type performance | | Caching Behavior | Analyze effects of chunk cache settings and flushing | | Additional Considerations | Latency, CPU/memory utilization |

Test Scenarios

  • Sequential and random read/write operations
  • Chunked and compressed dataset access
  • Parallel I/O using MPI
  • Large-scale dataset handling
  • Metadata access and update performance

Reporting and Analysis

Document test results with:

  • Summary of test configurations (Larry, Pull from CDash)
  • Tabulated performance metrics
  • Observations and anomalies
  • Recommendations for optimization
  • Comparison with baseline or previous versions
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