From e2bf7b7c447f1309a6cd08812e2663205ace3a3e Mon Sep 17 00:00:00 2001 From: henryhlam Date: Sat, 1 Nov 2025 00:15:36 +0800 Subject: [PATCH] Update mz_terms.csv Added the 4 other terms were mentioned in the long guidelines --- docs/guidelines/mz_terms.csv | 9 ++++++--- 1 file changed, 6 insertions(+), 3 deletions(-) diff --git a/docs/guidelines/mz_terms.csv b/docs/guidelines/mz_terms.csv index 1994f98..5b0f44c 100644 --- a/docs/guidelines/mz_terms.csv +++ b/docs/guidelines/mz_terms.csv @@ -1,4 +1,7 @@ Term,Intended Use -``MS:1000744|selected ion m/z``,"The selected precursor ion as reported by the instrument for isolation. Should be used for a `Spectrum`" -``MS:1003208|experimentally determined monoisotopic m/z``,"The monoisotopic peak of the selected ion as determined by the implementation. Usually used for a `Spectrum`, but for chimeric or ambiguous spectra may also be used in an `Interpretation` or `InterpretationMember`" -``MS:1003053|theoretical monoisotopic m/z``,"The theoretical m/z for an ion calculated by the implementation. Should be used for an `Analyte`" +``MS:1000744|selected ion m/z``,"The value copied from the same field in mzML file, meant to be the precursor monoisotopic m/z reported by the instrument, unmodified by the implementation. Should be used for a `Spectrum`." +``MS:1002234|selected precursor m/z``,"Avoid using in ``mzSpecLib`` due to ambiguity." +``MS:1003208|experimental precursor monoisotopic m/z``,"The monoisotopic m/z of the precursor ion as determined by the implementation. Recommended term to use. Usually used for a `Spectrum`, but for chimeric or ambiguous spectra may also be used in an `Interpretation` or `InterpretationMember`." +``MS:1000827|isolation window target m/z``,"The reference m/z value around which the mass spectrometer targets for fragmentation, which is usually not the monoisotopic m/z of the analyte. Should be used for a `Spectrum`." +``MS:1003053|theoretical monoisotopic m/z``,"The theoretical monoisotopic m/z for the precursor ion calculated from the molecular formula. Should be used for an `Analyte`." +``MS:1003054|theoretical average m/z``,"The theoretical average m/z for the precursor ion calculated from the molecular formula. Should be used for an `Analyte`."