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Description
Is your feature request related to a problem? Please describe.
Would be nice if we could put also an optional URL/Link/DOI to individual tables to an external document describing how the data was generated. Would allow/improve reproducibility or transparency of how the data was generated.
Describe the solution you'd like
This could be achieved by adding additional attributes in the metadata section of mzTab-M, e.g.
MTD small_molecule_summary-uri[1] https://...
We should also discuss if there would be a way to provide type of the link, so that some semantic meaning can be associated.
Describe alternatives you've considered
This could also be realized as part of a new methods part in the metadata of mzTab-M. We currently have sample_processing but having a more generic workflow part would also align better with the metadata we need to include for MetaboLights or other repositories.
Submitter Tasks
- Provide a pull request (Please add the link)
- Schema: Update mzTab_m_openapi.yml (View File)
- Specification: Update mzTab_format_specification_2_1-M.adoc with an example (View File)
- Example files: if possible, modify an existing or add a new example file (Existing example files)
Maintainer & WG Tasks
- Triage: Assign labels and Milestones to this issue.
- Discuss and review and approve PR.
Next Steps, once we reach an agreement on the changes above:
- Create a downstream issue in the jmzTab-m repo (https://github.com/lifs-tools/jmzTab-m/issues)
- Implement and test changes in jmzTab-M
- Implement changes in R & Python implementations
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