RAG-GNN/setup.py at main · HasiHays/RAG-GNN · GitHub

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"""
Setup script for RAG-GNN package.
"""

from setuptools import setup, find_packages

with open("README.md", "r", encoding="utf-8") as fh:
    long_description = fh.read()

setup(
    name="rag-gnn",
    version="0.1.0",
    author="Hasi Hays",
    author_email="hasih@uark.edu",
    description="Retrieval-Augmented Graph Neural Networks for Biological Network Analysis",
    long_description=long_description,
    long_description_content_type="text/markdown",
    url="https://github.com/hasihays/RAG-GNN",
    project_urls={
        "Bug Tracker": "https://github.com/hasihays/RAG-GNN/issues",
        "Documentation": "https://github.com/hasihays/RAG-GNN#readme",
    },
    classifiers=[
        "Development Status :: 3 - Alpha",
        "Intended Audience :: Science/Research",
        "License :: OSI Approved :: MIT License",
        "Operating System :: OS Independent",
        "Programming Language :: Python :: 3",
        "Programming Language :: Python :: 3.9",
        "Programming Language :: Python :: 3.10",
        "Programming Language :: Python :: 3.11",
        "Topic :: Scientific/Engineering :: Bio-Informatics",
        "Topic :: Scientific/Engineering :: Artificial Intelligence",
    ],
    packages=find_packages(),
    python_requires=">=3.9",
    install_requires=[
        "numpy>=1.21.0",
        "scipy>=1.7.0",
        "scikit-learn>=1.0.0",
        "networkx>=2.6.0",
        "pandas>=1.3.0",
        "matplotlib>=3.4.0",
    ],
    extras_require={
        "dev": [
            "pytest>=6.0.0",
            "pytest-cov>=2.0.0",
            "black>=21.0.0",
            "flake8>=3.9.0",
            "mypy>=0.900",
        ],
        "docs": [
            "sphinx>=4.0.0",
            "sphinx-rtd-theme>=0.5.0",
        ],
    },
)