readme.md

Contents

gtpc_modeled.pkl

A pickle file (via cloudpickle) containing an instance of the GeneralizedTPC class defined in TPC_params_latitudinal_generalization.ipynb, which represents a generalized thermal performance curve (as defined by Deutsch et al. 2008), parameterized latitudinally via modeled relationships. The class in this file is instantiated using models derived in TPC_params_latitudinal_generalization.ipynb. To use:

import cloudpickle
import numpy as np

with open("gtpc_modeled.pkl", 'rb') as f:
    gtpc = cloudpickle.load(f)
    
latitude = 45
_tpc = gtpc.getLatitudinalTPC(latitude)
_topt, _tmin, _tmax = gtpc.getTPCParameters(latitude)
T = np.linspace(10, 40)
T_e = _tpc(T)

TPC_params_latitudinal_generalization.ipynb

Producing latitudinal models of $T_\mathrm{min}$, $T_\mathrm{max}$, and $T_\mathrm{opt}$.

geographic_TPC_patterns.ipynb

An initial investigation into the latitudinal patterns present in phytoplankton TPC parameters.

aquamaps-globtherm.ipynb

(Outdated) An initial investigation into thermal tolerance exceedances for fish species in the Pinsky database.

[phytoplankton-sst.ipynb](./phytoplankton-sst.ipynb)

(Outdated) Proof-of-concept figures for the phytoplankton thermal tolerance idea.