Fix a typo that prevents production workflows from submissions. (#101)

* Fix a typo that prevents production workflows from submissions.

* Pre-release changes.

Author: rexwangcc

adapter_pipelines/Optimus/adapter.wdl

@@ -127,7 +127,7 @@ workflow AdapterOptimus {
   Int max_cromwell_retries = 0
   Boolean add_md5s = false
 
-  String pipeline_tools_version = "v0.40.0"
+  String pipeline_tools_version = "v0.41.0"
 
   call GetInputs as prep {
     input:

adapter_pipelines/cellranger/adapter.wdl

@@ -151,7 +151,7 @@ workflow Adapter10xCount {
   Int max_cromwell_retries = 0
   Boolean add_md5s = false
 
-  String pipeline_tools_version = "v0.40.0"
+  String pipeline_tools_version = "v0.41.0"
 
   call GetInputs {
     input:

adapter_pipelines/ss2_single_sample/adapter.wdl

@@ -83,7 +83,7 @@ workflow AdapterSmartSeq2SingleCell{
   Int max_cromwell_retries = 0
   Boolean add_md5s = false
 
-  String pipeline_tools_version = "v0.40.0"
+  String pipeline_tools_version = "v0.41.0"
 
   call GetInputs as prep {
     input:

adapter_pipelines/submit.wdl

@@ -29,7 +29,7 @@ task get_metadata {
       --use_caas ${use_caas}
   >>>
   runtime {
-    docker: (if runtime_environment == "production" then "gcr.io/hca-dcp-pipelines-prod/cromwell-metadata:" else "gcr.io/broad-dsde-mint-${runtime_environment}/cromwell-metadata:") + "v1.2.0"
+    docker: (if runtime_environment == "prod" then "gcr.io/hca-dcp-pipelines-prod/cromwell-metadata:" else "gcr.io/broad-dsde-mint-${runtime_environment}/cromwell-metadata:") + "v1.2.0"
     maxRetries: max_retries
   }
   output {