Error: Invalid or corrupt jarfile

[gurpreet-bioinfo]

Hi @tmosbruger @tjparnell @DavidAustinNix,

I am trying to run jar files under /HuntsmanCancerInstitute/RBSSeqTools-master/Releases/BSSeqTools_1.0/rbsseq after unzipping SourceCode.zip and it shows the following error:
Error: Invalid or corrupt jarfile

Do you have any manual/documentation available for RBSSeqTools?

Please advise.
Thanks.

[DavidAustinNix]

Hello Gurpreet,

Try downloading the BSSeqTools_1.0.zip archive, unzip it on a linux/ mac, then launch one of the applications:

java -jar -Xmx2G BSSeqTools_1.0/Apps/CreateMethTable

or

java -jar -Xmx2G BSSeqTools_1.0/Apps/ScorePseudouridinePositions

without arguments to print the help menus. This works for me using Java 1.8.

-cheers, David

[gurpreet-bioinfo]

Thanks @DavidAustinNix , it's working !

[DavidAustinNix]

Hello Gurpreet, Try downloading the BSSeqTools_1.0.zip archive, unzip it on a linux/ mac, then launch one of the applications: java -jar -Xmx2G BSSeqTools_1.0/Apps/CreateMethTable or java -jar -Xmx2G BSSeqTools_1.0/Apps/ScorePseudouridinePositions without arguments to print the help menus. This works for me using Java 1.8.

…

-cheers, David David Austin Nix, PhD Director, HCI Bioinformatic Analysis Shared Resource (BASR) Huntsman Cancer Institute and the University of Utah 801-901-0649 ***@***.*** https://uofuhealth.utah.edu/huntsman/shared-resources/gba/bioinformatics/

On Apr 22, 2022, at 2:42 PM, Gurpreet Kaur ***@***.***> wrote: Hi @tmosbruger <https://github.com/tmosbruger> @tjparnell <https://github.com/tjparnell> @DavidAustinNix <https://github.com/DavidAustinNix>, I am trying to run jar files under /HuntsmanCancerInstitute/RBSSeqTools-master/Releases/BSSeqTools_1.0/rbsseq after unzipping SourceCode.zip and it shows the following error: Error: Invalid or corrupt jarfile Do you have any manual/documentation available for RBSSeqTools? Please advise. Thanks. — Reply to this email directly, view it on GitHub <#3>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AC2V6DNOCYYQTYR2C4CQDCTVGMFJTANCNFSM5UDKUH5Q>. You are receiving this because you were mentioned.