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55### Preprocessing
66
7+ The preprocessing pipeline follows the official nnU-Net v2 workflow
8+ (reorientation, resampling, intensity normalisation, etc.).
9+
710### Augmentations
811
12+ PSAT introduces a contraction-based augmentation strategy to expose the network
13+ to stronger anatomical scaling. This is achieved by modifying the
14+ ` SpatialTransform ` in nnU-Net so that random scaling factors are sampled from a
15+ wider range ` (0.7, 2.5) ` rather than the default ` (0.7, 1.4) ` . Mirroring is disabled
16+ for the experiments.
17+
918### Training
19+
20+ Several custom trainers are provided to support different experimental setups.
21+ ` nnUNetTrainer_400epochs_NoMirroring_Finetune_lr_1e4 ` and
22+ ` nnUNetTrainer_200epochs_NoMirroring_Finetune_lr_1e4 ` perform fine‑tuning with a
23+ lower learning rate and without mirroring. The
24+ ` nnUNetTrainer_1000epochs_NoMirroring_contraction ` variants train from scratch
25+ for 1000 epochs while applying the contraction augmentation described above.
26+
27+ All trainers inherit from ` nnUNetTrainer ` and thus retain full compatibility
28+ with the nnU-Net v2 command line tools.
29+
30+
31+ You have to place the scripts in your nnUNetv2 library corresponding folders.
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